Difference between revisions of "2.5.1.64-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-4355 RXN1G-4355] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-4355 RXN1G-4355] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** probable_gamma_hydroxybutyrate_dehydrogenase
 +
** gamma_hydroxybutyrate_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.4.1.3 EC-6.4.1.3]
+
** [http://enzyme.expasy.org/EC/1.1.1.61 EC-1.1.1.61]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[CPD1G-277]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[CPD1G-332]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[4-HYDROXY-BUTYRATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 cerotoyl-CoA[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 2-carboxy-cerotoyl-CoA[c] '''+''' 1 H+[c]
+
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 succinate semialdehyde[c] '''=>''' 1 NAD+[c] '''+''' 1 4-hydroxybutanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5029]]
+
* Gene: [[Tiso_gene_777]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_91]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* [[PWY-5677]], succinate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5677 PWY-5677]
−
** '''86''' reactions found over '''182''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23948 23948]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01644 R01644]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q59104 Q59104]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.4.1.3}}
+
{{#set: common name=probable_gamma_hydroxybutyrate_dehydrogenase}}
−
{{#set: gene associated=Tiso_gene_5029}}
+
{{#set: common name=gamma_hydroxybutyrate_dehydrogenase}}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: ec number=EC-1.1.1.61}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_777|Tiso_gene_91}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: in pathway=PWY-5677|PWY-5022}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 17:08, 21 March 2018

Reaction 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_gamma_hydroxybutyrate_dehydrogenase
    • gamma_hydroxybutyrate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADH[c] + 1 succinate semialdehyde[c] => 1 NAD+[c] + 1 4-hydroxybutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5677, succinate fermentation to butanoate: PWY-5677
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5022, 4-aminobutanoate degradation V: PWY-5022
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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