Difference between revisions of "MRNA-Fragments"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** s-adenosylmethionin...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Crotonyl-ACPs Crotonyl-ACPs] == * common name: ** a crotonyl-[acp] * Synonym(s): ** a trans-but...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Crotonyl-ACPs Crotonyl-ACPs] ==
−
* direction:
+
−
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
−
** s-adenosylmethionine_decarboxylase_proenzyme
+
** a crotonyl-[acp]
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/4.1.1.50 EC-4.1.1.50]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** a trans-but-2-enoyl-[acp]
 +
** a (2E)-but-2-enoyl-[acp]
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN-9657]]
−
** 1 [[PROTON]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* [[RXN-9515]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 H+[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 CO2[c]
+
* [[4.2.1.58-RXN]]
−
 
+
== Reaction(s) of unknown directionality ==
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_11030]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4269]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=a crotonyl-[acp]}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981]
+
{{#set: common name=a trans-but-2-enoyl-[acp]|a (2E)-but-2-enoyl-[acp]}}
−
* LIGAND-RXN:
+
{{#set: consumed by=RXN-9657|RXN-9515}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00178 R00178]
+
{{#set: produced by=4.2.1.58-RXN}}
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P82184 P82184]
+
−
** [http://www.uniprot.org/uniprot/P21182 P21182]
+
−
** [http://www.uniprot.org/uniprot/P0A7F6 P0A7F6]
+
−
** [http://www.uniprot.org/uniprot/P17707 P17707]
+
−
** [http://www.uniprot.org/uniprot/P28918 P28918]
+
−
** [http://www.uniprot.org/uniprot/P17708 P17708]
+
−
** [http://www.uniprot.org/uniprot/P50243 P50243]
+
−
** [http://www.uniprot.org/uniprot/P46255 P46255]
+
−
** [http://www.uniprot.org/uniprot/Q04694 Q04694]
+
−
** [http://www.uniprot.org/uniprot/Q42679 Q42679]
+
−
** [http://www.uniprot.org/uniprot/Q42829 Q42829]
+
−
** [http://www.uniprot.org/uniprot/P79888 P79888]
+
−
** [http://www.uniprot.org/uniprot/O04009 O04009]
+
−
** [http://www.uniprot.org/uniprot/O24575 O24575]
+
−
** [http://www.uniprot.org/uniprot/Q43820 Q43820]
+
−
** [http://www.uniprot.org/uniprot/Q39676 Q39676]
+
−
** [http://www.uniprot.org/uniprot/Q39677 Q39677]
+
−
** [http://www.uniprot.org/uniprot/O49972 O49972]
+
−
** [http://www.uniprot.org/uniprot/O65354 O65354]
+
−
** [http://www.uniprot.org/uniprot/O02655 O02655]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=s-adenosylmethionine_decarboxylase_proenzyme}}
+
−
{{#set: ec number=EC-4.1.1.50}}
+
−
{{#set: gene associated=Tiso_gene_11030|Tiso_gene_4269}}
+
−
{{#set: in pathway=BSUBPOLYAMSYN-PWY|ARGSPECAT-PWY|PWY-6834}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 17:09, 21 March 2018

Metabolite Crotonyl-ACPs

  • common name:
    • a crotonyl-[acp]
  • Synonym(s):
    • a trans-but-2-enoyl-[acp]
    • a (2E)-but-2-enoyl-[acp]

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"a crotonyl-[acp" cannot be used as a page name in this wiki.
  • "a trans-but-2-enoyl-[acp" cannot be used as a page name in this wiki.
  • "a (2E)-but-2-enoyl-[acp" cannot be used as a page name in this wiki.


Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=MRNA-Fragments&oldid=39141"