Difference between revisions of "Manual-export biomass rxn"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17782 RXN-17782] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-471 RXN1G-471] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis,cis-delta1...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17782 RXN-17782] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-471 RXN1G-471] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acetyl-_c-acetyltransferase
+
** trans-delta2-cis,cis-delta19,37-C56:3-[acyl-carrier protein] reductase
−
** thiolase
+
−
** 3-ketoacyl-_thiolase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/1.3.1.M4 EC-1.3.1.M4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-19167]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-15436]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[trans-D2-cis-cis-D19-37-C56-3-ACPs]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[cis-cis-D19-37-C56-2-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-oxo-(7Z)-hexadecenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 (5Z)-tetradecenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
+
** 1 H+[c] '''+''' 1 a trans-delta2-cis,cis-delta19,37-C56:3-[acp][c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 a cis,cis-delta19-37-C56:2-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3855]]
+
* Gene: [[Tiso_gene_10778]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3856]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17451]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10116]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15327]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
 +
** '''86''' reactions found over '''182''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: common name=trans-delta2-cis,cis-delta19,37-C56:3-[acyl-carrier protein] reductase}}
−
{{#set: common name=thiolase}}
+
{{#set: ec number=EC-1.3.1.M4}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: gene associated=Tiso_gene_10778}}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: in pathway=PWYG-321}}
−
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_3856|Tiso_gene_17451|Tiso_gene_10116|Tiso_gene_15327}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 16:09, 21 March 2018

Reaction RXN1G-471

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trans-delta2-cis,cis-delta19,37-C56:3-[acyl-carrier protein] reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 86 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

"trans-delta2-cis,cis-delta19,37-C56:3-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.




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