Difference between revisions of "Category:Gene"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UTPHEXPURIDYLYLTRANS-RXN UTPHEXPURIDYLYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTOLDEHYD-RXN HISTOLDEHYD-RXN] == * direction: ** REVERSIBLE * common name: ** histidinol_dehydro...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UTPHEXPURIDYLYLTRANS-RXN UTPHEXPURIDYLYLTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTOLDEHYD-RXN HISTOLDEHYD-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** dp-n-acetylglucosamine_pyrophosphorylase
+
** histidinol_dehydrogenase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.7.7.64 EC-2.7.7.64]
+
−
** [http://enzyme.expasy.org/EC/2.7.7.10 EC-2.7.7.10]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GALACTOSE-1P]][c] '''+''' 1 [[UTP]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CPD-14553]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[HISTIDINOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[HISTIDINAL]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 &alpha;-D-galactose 1-phosphate[c] '''+''' 1 UTP[c] '''+''' 1 H+[c] '''<=>''' 1 UDP-&alpha;-D-galactose[c] '''+''' 1 diphosphate[c]
+
** 1 histidinol[c] '''+''' 1 NAD+[c] '''<=>''' 1 histidinal[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9110]]
+
* Gene: [[Tiso_gene_11386]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_6457]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_6459]]
+
** Source: [[orthology-synechocystis]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_7381]]
−
* [[Tiso_gene_14796]]
+
** Source: [[orthology-esiliculosus]]
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_17566]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_6458]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
+
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14209 14209]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33799 33799]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00502 R00502]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03012 R03012]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P22714 P22714]
+
** [http://www.uniprot.org/uniprot/P24226 P24226]
−
** [http://www.uniprot.org/uniprot/P96994 P96994]
+
** [http://www.uniprot.org/uniprot/P44001 P44001]
−
** [http://www.uniprot.org/uniprot/P39575 P39575]
+
** [http://www.uniprot.org/uniprot/O34651 O34651]
−
** [http://www.uniprot.org/uniprot/P40908 P40908]
+
** [http://www.uniprot.org/uniprot/P63950 P63950]
 +
** [http://www.uniprot.org/uniprot/Q9RSI4 Q9RSI4]
 +
** [http://www.uniprot.org/uniprot/Q02136 Q02136]
 +
** [http://www.uniprot.org/uniprot/Q9JTH9 Q9JTH9]
 +
** [http://www.uniprot.org/uniprot/O30027 O30027]
 +
** [http://www.uniprot.org/uniprot/Q9PM77 Q9PM77]
 +
** [http://www.uniprot.org/uniprot/P10370 P10370]
 +
** [http://www.uniprot.org/uniprot/P06988 P06988]
 +
** [http://www.uniprot.org/uniprot/O66976 O66976]
 +
** [http://www.uniprot.org/uniprot/Q58851 Q58851]
 +
** [http://www.uniprot.org/uniprot/O26327 O26327]
 +
** [http://www.uniprot.org/uniprot/Q9X0D1 Q9X0D1]
 +
** [http://www.uniprot.org/uniprot/P18786 P18786]
 +
** [http://www.uniprot.org/uniprot/P28736 P28736]
 +
** [http://www.uniprot.org/uniprot/P45353 P45353]
 +
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 +
** [http://www.uniprot.org/uniprot/P72946 P72946]
 +
** [http://www.uniprot.org/uniprot/P73058 P73058]
 +
** [http://www.uniprot.org/uniprot/P00815 P00815]
 +
** [http://www.uniprot.org/uniprot/P07685 P07685]
 +
** [http://www.uniprot.org/uniprot/P16245 P16245]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=dp-n-acetylglucosamine_pyrophosphorylase}}
+
{{#set: common name=histidinol_dehydrogenase}}
−
{{#set: ec number=EC-2.7.7.64}}
+
{{#set: gene associated=Tiso_gene_11386|Tiso_gene_7381}}
−
{{#set: ec number=EC-2.7.7.10}}
+
{{#set: in pathway=HISTSYN-PWY}}
−
{{#set: gene associated=Tiso_gene_9110|Tiso_gene_6457|Tiso_gene_6459|Tiso_gene_14796|Tiso_gene_17566|Tiso_gene_6458}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: in pathway=PWY-6527|PWY-3821}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 16:09, 21 March 2018

Reaction HISTOLDEHYD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • histidinol_dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 histidinol[c] + 1 NAD+[c] <=> 1 histidinal[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Pages in category "Gene"

The following 200 pages are in this category, out of 2,723 total.

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