Difference between revisions of "RXN-14047"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8642 RXN-8642] == * direction: ** REVERSIBLE * common name: ** ORF * Synonym(s): ** oxalsuccini...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14047 RXN-14047] == * direction: ** REVERSIBLE * common name: ** Aconitate hydratase 2 (Aconita...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8642 RXN-8642] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14047 RXN-14047] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** ORF
+
** Aconitate hydratase 2 (Aconitase)
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.3 EC-4.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
−
** oxalsuccinic decarboxylase
 
−
** isocitrate (NADP) dehydrogenase
 
−
** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 
−
** NADP-specific isocitrate dehydrogenase
 
−
** NADP-linked isocitrate dehydrogenase
 
−
** NADP isocitric dehydrogenase
 
−
** isocitrate dehydrogenase (NADP-dependent)
 
−
** NADP-dependent isocitric dehydrogenase
 
−
** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 
−
** NADP+-linked isocitrate dehydrogenase
 
−
** IDH (ambiguous)
 
−
** dual-cofactor-specific isocitrate dehydrogenase
 
−
** NADP+-ICDH
 
−
** NADP+-IDH
 
−
** IDP
 
−
** IDP1
 
−
** IDP2
 
−
** IDP3
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[CIT]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxalosuccinate[c] '''+''' 1 H+[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 CO2[c]
+
** 1 citrate[c] '''<=>''' 1 D-threo-isocitrate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18262]]
+
* Gene: [[Tiso_gene_13007]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10809]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-primary_network]]
−
*** [[esiliculosus]]
+
* Category: [[annotation]]
−
* [[annotation]]:
+
** Source: [[annotation-experimental_annotation]]
−
** [[pathwaytools]]:
+
*** Tool: [[pathwaytools]]
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01324 R01324]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=ORF}}
+
{{#set: common name=Aconitate hydratase 2 (Aconitase)}}
−
{{#set: common name=oxalsuccinic decarboxylase|isocitrate (NADP) dehydrogenase|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|NADP-specific isocitrate dehydrogenase|NADP-linked isocitrate dehydrogenase|NADP isocitric dehydrogenase|isocitrate dehydrogenase (NADP-dependent)|NADP-dependent isocitric dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|NADP+-linked isocitrate dehydrogenase|IDH (ambiguous)|dual-cofactor-specific isocitrate dehydrogenase|NADP+-ICDH|NADP+-IDH|IDP|IDP1|IDP2|IDP3}}
+
{{#set: ec number=EC-4.2.1.3}}
−
{{#set: gene associated=Tiso_gene_18262|Tiso_gene_10809}}
+
{{#set: gene associated=Tiso_gene_13007}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=manual|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=manual-primary_network|annotation-experimental_annotation}}
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:04, 21 March 2018

Reaction RXN-14047

  • direction:
    • REVERSIBLE
  • common name:
    • Aconitate hydratase 2 (Aconitase)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 citrate[c] <=> 1 D-threo-isocitrate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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