|
|
| (One intermediate revision by the same user not shown) |
| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-C-PALMITOYLTRANSFERASE-RXN SERINE-C-PALMITOYLTRANSFERASE-RXN] == | + | == Gene Tiso_gene_18651 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** serine_palmitoyltransferase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.50 EC-2.3.1.50]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * Reaction: [[4-NITROPHENYLPHOSPHATASE-RXN]] |
| − | ** 1 [[SER]][c] '''+''' 1 [[PALMITYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1 L-serine[c] '''+''' 1 palmitoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 3-dehydrosphinganine[c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_10992]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
| + | |
| − | ** '''3''' reactions found over '''13''' reactions in the full pathway
| + | |
| − | * [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12]
| + | |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | * [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
| + | |
| − | ** '''2''' reactions found over '''8''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| | ** Source: [[orthology-esiliculosus]] | | ** Source: [[orthology-esiliculosus]] |
| − | *** Tool: [[pantograph]]
| + | == Pathways associated == |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=4-NITROPHENYLPHOSPHATASE-RXN}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14761 14761]
| + | |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01281 R01281]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P25045 P25045]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O15270 O15270]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P48241 P48241]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q09925 Q09925]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P40970 P40970]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9XVI6 Q9XVI6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q20375 Q20375]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9M304 Q9M304]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=serine_palmitoyltransferase}}
| + | |
| − | {{#set: ec number=EC-2.3.1.50}}
| + | |
| − | {{#set: gene associated=Tiso_gene_10992}}
| + | |
| − | {{#set: in pathway=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}}
| + | |
| − | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
