Difference between revisions of "PNPOXI-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNPOXI-RXN PNPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine_5_-phosphate...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNPOXI-RXN PNPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine_5_-phosphate...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PYRIDOXINE-5P]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 pyridoxine 5'-phosphate[c] '''+''' 1 oxygen[c] '''=>''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 hydrogen peroxide[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[Tiso_gene_1471]] | + | * Gene: [[Tiso_gene_1471]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***EC-NUMBER | + | *** Assignment: EC-NUMBER |
| − | ** [[ | + | ** Source: [[orthology-esiliculosus]] |
== Pathways == | == Pathways == | ||
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204] | * [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204] | ||
| Line 31: | Line 31: | ||
** '''3''' reactions found over '''8''' reactions in the full pathway | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| − | * [[annotation]] | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| Line 47: | Line 47: | ||
{{#set: gene associated=Tiso_gene_1471}} | {{#set: gene associated=Tiso_gene_1471}} | ||
{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY|PYRIDOXSYN-PWY}} | {{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY|PYRIDOXSYN-PWY}} | ||
| − | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=orthology|annotation}} |
| − | + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | |
| − | {{#set: reconstruction source=esiliculosus | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | + | ||
| − | {{#set: reconstruction tool=pathwaytools | + | |
| − | + | ||
Latest revision as of 19:05, 21 March 2018
Contents
Reaction PNPOXI-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- pyridoxamine_5_-phosphate_oxidase-related_fmn-binding
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PYRIDOXINE-5P[c] + 1 OXYGEN-MOLECULE[c] => 1 PYRIDOXAL_PHOSPHATE[c] + 1 HYDROGEN-PEROXIDE[c]
- With common name(s):
- 1 pyridoxine 5'-phosphate[c] + 1 oxygen[c] => 1 pyridoxal 5'-phosphate[c] + 1 hydrogen peroxide[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_1471
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
- 8 reactions found over 9 reactions in the full pathway
- PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
- 6 reactions found over 9 reactions in the full pathway
- PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
- 5 reactions found over 5 reactions in the full pathway
- PYRIDOXSYN-PWY, pyridoxal 5'-phosphate biosynthesis I: PYRIDOXSYN-PWY
- 3 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
