Difference between revisions of "PWY-5913"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-11...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6906 PWY-6906] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-641 TAX-641]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-1118]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1217 TAX-1217]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
−
** chitin derivatives degradation
+
** partial TCA cycle (obligate autotrophs)
 
* Synonym(s):
 
* Synonym(s):
 +
** TCA cycle VI (obligate autotrophs)
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''1''' reactions found over '''8''' reactions in the full pathway
+
  '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PHOSACETYLGLUCOSAMINEMUT-RXN]]
+
* [[ACONITATEDEHYDR-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_13007]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
* [[ACONITATEHYDR-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_13007]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[ASPAMINOTRANS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_17718]]
 +
*** [[Tiso_gene_6815]]
 +
*** [[Tiso_gene_13538]]
 +
*** [[Tiso_gene_15680]]
 +
*** [[Tiso_gene_17809]]
 +
*** [[Tiso_gene_12889]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[CITSYN-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18030]]
 +
*** [[Tiso_gene_9601]]
 +
*** [[Tiso_gene_9603]]
 +
*** [[Tiso_gene_9602]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_3691]]
 +
*** [[Tiso_gene_6720]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[GLUTDEHYD-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_2581]]
 +
*** [[Tiso_gene_1154]]
 +
*** [[Tiso_gene_11511]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[ISOCITDEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_18262]]
 +
*** [[Tiso_gene_10809]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[MALATE-DEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
 +
*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_15846]]
 +
*** [[Tiso_gene_11866]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSAMINE-6-P-DEAMIN-RXN GLUCOSAMINE-6-P-DEAMIN-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSAMINE-KINASE-RXN GLUCOSAMINE-KINASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14970 RXN-14970]
−
* [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLGLUCOSAMINE-KINASE-RXN N-ACETYLGLUCOSAMINE-KINASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=NAG6PDEACET-RXN NAG6PDEACET-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12627 RXN-12627]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12629 RXN-12629]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-445 TRANS-RXN0-445]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-641}}
+
{{#set: taxonomic range=TAX-1118}}
−
{{#set: common name=chitin derivatives degradation}}
+
{{#set: taxonomic range=TAX-1217}}
−
{{#set: reaction found=1}}
+
{{#set: taxonomic range=TAX-1224}}
−
{{#set: reaction not found=8}}
+
{{#set: common name=partial TCA cycle (obligate autotrophs)}}
−
{{#set: completion rate=13.0}}
+
{{#set: common name=TCA cycle VI (obligate autotrophs)}}
 +
{{#set: reaction found=9}}
 +
{{#set: total reaction=11}}
 +
{{#set: completion rate=82.0}}

Latest revision as of 19:05, 21 March 2018

Pathway PWY-5913

  • taxonomic range:
  • common name:
    • partial TCA cycle (obligate autotrophs)
  • Synonym(s):
    • TCA cycle VI (obligate autotrophs)

Reaction(s) found

9 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5913&oldid=39392"