Difference between revisions of "PWY-5913"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UBIQUINONE-8 UBIQUINONE-8] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-11...")
 
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Pathway]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UBIQUINONE-8 UBIQUINONE-8] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] ==
−
* smiles:
+
* taxonomic range:
−
** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCC1(C(C(OC)=C(OC)C(=O)C(C)=1)=O)
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-1118]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1217 TAX-1217]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
−
** ubiquinone-8
+
** partial TCA cycle (obligate autotrophs)
−
* inchi key:
+
−
** InChIKey=ICFIZJQGJAJRSU-SGHXUWJISA-N
+
−
* molecular weight:
+
−
** 727.121   
+
 
* Synonym(s):
 
* Synonym(s):
−
** ubiquinone(8)
+
** TCA cycle VI (obligate autotrophs)
−
** coenzyme-Q8
+
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction(s) found ==
−
* [[NADHor_2m]]
+
'''9''' reactions found over '''11''' reactions in the full pathway
−
== Reaction(s) known to produce the compound ==
+
* [[ACONITATEDEHYDR-RXN]]
−
== Reaction(s) of unknown directionality ==
+
** 1 associated gene(s):
 +
*** [[Tiso_gene_13007]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
* [[ACONITATEHYDR-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_13007]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[ASPAMINOTRANS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_17718]]
 +
*** [[Tiso_gene_6815]]
 +
*** [[Tiso_gene_13538]]
 +
*** [[Tiso_gene_15680]]
 +
*** [[Tiso_gene_17809]]
 +
*** [[Tiso_gene_12889]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[CITSYN-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18030]]
 +
*** [[Tiso_gene_9601]]
 +
*** [[Tiso_gene_9603]]
 +
*** [[Tiso_gene_9602]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_3691]]
 +
*** [[Tiso_gene_6720]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[GLUTDEHYD-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_2581]]
 +
*** [[Tiso_gene_1154]]
 +
*** [[Tiso_gene_11511]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[ISOCITDEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_18262]]
 +
*** [[Tiso_gene_10809]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[MALATE-DEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
 +
*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_15846]]
 +
*** [[Tiso_gene_11866]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14970 RXN-14970]
 
== External links  ==
 
== External links  ==
−
* CAS : 1339-63-5
+
{{#set: taxonomic range=TAX-1118}}
−
* PUBCHEM:
+
{{#set: taxonomic range=TAX-1217}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5283546 5283546]
+
{{#set: taxonomic range=TAX-1224}}
−
* LIGAND-CPD:
+
{{#set: common name=partial TCA cycle (obligate autotrophs)}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C17569 C17569]
+
{{#set: common name=TCA cycle VI (obligate autotrophs)}}
−
* CHEMSPIDER:
+
{{#set: reaction found=9}}
−
** [http://www.chemspider.com/Chemical-Structure.4446659.html 4446659]
+
{{#set: total reaction=11}}
−
* CHEBI:
+
{{#set: completion rate=82.0}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=61683 61683]
+
−
* BIGG : q8
+
−
{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCC1(C(C(OC)=C(OC)C(=O)C(C)=1)=O)}}
+
−
{{#set: common name=ubiquinone-8}}
+
−
{{#set: inchi key=InChIKey=ICFIZJQGJAJRSU-SGHXUWJISA-N}}
+
−
{{#set: molecular weight=727.121    }}
+
−
{{#set: common name=ubiquinone(8)|coenzyme-Q8}}
+
−
{{#set: consumed by=NADHor_2m}}
+

Latest revision as of 19:05, 21 March 2018

Pathway PWY-5913

  • taxonomic range:
  • common name:
    • partial TCA cycle (obligate autotrophs)
  • Synonym(s):
    • TCA cycle VI (obligate autotrophs)

Reaction(s) found

9 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5913&oldid=39392"