Difference between revisions of "Tiso gene 14743"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11680 RXN-11680] == * direction: ** LEFT-TO-RIGHT * common name: ** Delta-6 fatty acid desatura...")
 
(Created page with "Category:Gene == Gene Tiso_gene_14743 == * right end position: ** 4406 * transcription direction: ** POSITIVE * left end position: ** 3625 * centisome position: ** 66.4528...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11680 RXN-11680] ==
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== Gene Tiso_gene_14743 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4406
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* common name:
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* transcription direction:
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** Delta-6 fatty acid desaturase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.14.19.47 EC-1.14.19.47]
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** 3625
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* centisome position:
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** 66.4528   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLYCINE--TRNA-LIGASE-RXN]]
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** 1 [[Linoleoyl-groups]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[Gamma-linolenoyl-groups]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a [glycerolipid]-linoleate[c] '''+''' 2 H+[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 1 oxygen[c] '''=>''' 2 H2O[c] '''+''' 2 a ferricytochrome b5[c] '''+''' 1 a [glycerolipid]-γ-linolenate[c]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[TRNA-CHARGING-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9580]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8027]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18205]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7427]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18056]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6603]], dicranin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6603 PWY-6603]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=4406}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07063 R07063]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3625}}
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{{#set: common name=Delta-6 fatty acid desaturase}}
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{{#set: centisome position=66.4528    }}
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{{#set: ec number=EC-1.14.19.47}}
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{{#set: reaction associated=GLYCINE--TRNA-LIGASE-RXN}}
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{{#set: gene associated=Tiso_gene_9580|Tiso_gene_8027|Tiso_gene_18205|Tiso_gene_7427|Tiso_gene_18056}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: in pathway=PWY-5353|PWY-6603}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:05, 21 March 2018

Gene Tiso_gene_14743

  • right end position:
    • 4406
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3625
  • centisome position:
    • 66.4528
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14743&oldid=39396"