Difference between revisions of "Tiso gene 18028"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHAGLYPSYN-RXN PHOSPHAGLYPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enz...")
(Created page with "Category:Gene == Gene Tiso_gene_18028 == * right end position: ** 3205 * transcription direction: ** POSITIVE * left end position: ** 573 * centisome position: ** 17.32688...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHAGLYPSYN-RXN PHOSPHAGLYPSYN-RXN] ==
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== Gene Tiso_gene_18028 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3205
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.7.8.5 EC-2.7.8.5]
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** POSITIVE
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* left end position:
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** 573
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* centisome position:
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** 17.326883   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''=>''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CMP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a CDP-diacylglycerol[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''=>''' 1 1-(3-sn-phosphatidyl)-sn-glycerol 3-phosphate[c] '''+''' 1 H+[c] '''+''' 1 CMP[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-7 PWY4FS-7]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5269]], cardiolipin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5269 PWY-5269]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-5668]], cardiolipin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY0-1545]], cardiolipin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1545 PWY0-1545]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3205}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12593 12593]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=573}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01801 R01801]
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{{#set: centisome position=17.326883    }}
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* UNIPROT:
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JTH1 Q9JTH1]
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** [http://www.uniprot.org/uniprot/P46322 P46322]
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** [http://www.uniprot.org/uniprot/P44528 P44528]
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** [http://www.uniprot.org/uniprot/P47360 P47360]
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** [http://www.uniprot.org/uniprot/Q9PNM7 Q9PNM7]
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** [http://www.uniprot.org/uniprot/O25660 O25660]
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** [http://www.uniprot.org/uniprot/O51663 O51663]
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** [http://www.uniprot.org/uniprot/O67908 O67908]
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** [http://www.uniprot.org/uniprot/Q49839 Q49839]
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** [http://www.uniprot.org/uniprot/P75520 P75520]
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** [http://www.uniprot.org/uniprot/P74372 P74372]
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** [http://www.uniprot.org/uniprot/Q48959 Q48959]
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** [http://www.uniprot.org/uniprot/P0ABF8 P0ABF8]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.7.8.5}}
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{{#set: in pathway=PWY4FS-7|PWY4FS-8|PWY-5269|PWY-7817|PWY-5668|PWY0-1545}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:05, 21 March 2018

Gene Tiso_gene_18028

  • right end position:
    • 3205
  • transcription direction:
    • POSITIVE
  • left end position:
    • 573
  • centisome position:
    • 17.326883
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18028&oldid=39428"