Difference between revisions of "Tiso gene 5063"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.141-RXN 2.4.1.141-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Gene == Gene Tiso_gene_5063 == * right end position: ** 6847 * transcription direction: ** POSITIVE * left end position: ** 5221 * centisome position: ** 37.43189...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.141-RXN 2.4.1.141-RXN] ==
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== Gene Tiso_gene_5063 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6847
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.4.1.141 EC-2.4.1.141]
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** POSITIVE
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* left end position:
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** 5221
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* centisome position:
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** 37.43189   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[CPD-190]][c] '''=>''' 1 [[NN-DIACETYLCHITOBIOSYLDIPHOSPHODOLICHO]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 UDP-N-acetyl-α-D-glucosamine[c] '''+''' 1 N-acetyl-α-D-glucosaminyl-diphosphodolichol[c] '''=>''' 1 N-acetyl-β-D-glucosaminyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphosphodolichol[c] '''+''' 1 H+[c] '''+''' 1 UDP[c]
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* Reaction: [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-16030]]
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** Source: [[annotation-in-silico_annotation]]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-16121]]
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* [[annotation]]:
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** Source: [[annotation-in-silico_annotation]]
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** [[pathwaytools]]:
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*** Assignment: ec-number
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*** [[in-silico_annotation]]
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* Reaction: [[RXN-17730]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7782]]
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* [[TRIGLSYN-PWY]]
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* [[PWY-6453]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=6847}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04494 R04494]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=5221}}
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{{#set: ec number=EC-2.4.1.141}}
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{{#set: centisome position=37.43189    }}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN|PHOSPHATIDATE-PHOSPHATASE-RXN|RXN-16030|RXN-16121|RXN-17730}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7782|TRIGLSYN-PWY|PWY-6453}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:05, 21 March 2018

Gene Tiso_gene_5063

  • right end position:
    • 6847
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5221
  • centisome position:
    • 37.43189
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5063&oldid=39432"