Difference between revisions of "RXN-10704"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10704 RXN-10704] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10704 RXN-10704] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** plant sterol biosynthesis
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''10''' reactions found over '''36''' reactions in the full pathway
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* With identifiers:
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* [[1.14.13.70-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-11522]][c] '''=>''' 1 [[CPD-11523]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_8263]]
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** 1 H2O[c] '''+''' 1 OPC6-trans-2-enoyl-CoA[c] '''=>''' 1 OPC6-3-hydroxyacyl-CoA[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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== Genes associated with this reaction  ==
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* [[2.1.1.143-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 associated gene(s):
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* Gene: [[Tiso_gene_16145]]
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*** [[Tiso_gene_11850]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_11849]]
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* Gene: [[Tiso_gene_6885]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_14262]]
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* [[CYCLOARTENOL-SYNTHASE-RXN]]
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** Source: [[orthology-esiliculosus]]
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** 1 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_14526]]
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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** 3 reconstruction source(s) associated:
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** '''15''' reactions found over '''19''' reactions in the full pathway
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*** [[orthology-athaliana]]
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== Reconstruction information  ==
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*** [[orthology-creinhardtii]]
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* Category: [[orthology]]
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*** [[orthology-esiliculosus]]
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** Source: [[orthology-esiliculosus]]
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* [[CYCLOEUCALENOL-CYCLOISOMERASE-RXN]]
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*** Tool: [[pantograph]]
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** 1 associated gene(s):
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*** [[Tiso_gene_10532]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-4021]]
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** 3 associated gene(s):
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*** [[Tiso_gene_11849]]
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*** [[Tiso_gene_11850]]
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*** [[Tiso_gene_12590]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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* [[RXN-4144]]
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** 1 associated gene(s):
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*** [[Tiso_gene_10982]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-4209]]
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** 1 associated gene(s):
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*** [[Tiso_gene_5446]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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* [[RXN-4210]]
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** 1 associated gene(s):
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*** [[Tiso_gene_8982]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN-707]]
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** 1 associated gene(s):
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*** [[Tiso_gene_8982]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN3O-218]]
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** 1 associated gene(s):
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*** [[Tiso_gene_5446]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11925 RXN-11925]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11926 RXN-11926]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11927 RXN-11927]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11928 RXN-11928]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11929 RXN-11929]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11930 RXN-11930]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11931 RXN-11931]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11932 RXN-11932]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11933 RXN-11933]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11934 RXN-11934]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11935 RXN-11935]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11936 RXN-11936]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11937 RXN-11937]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11938 RXN-11938]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11939 RXN-11939]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4161 RXN-4161]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4221 RXN-4221]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4222 RXN-4222]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4224 RXN-4224]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4242 RXN-4242]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4243 RXN-4243]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-708 RXN-708]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8352 RXN-8352]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8353 RXN-8353]
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== External links  ==
 
== External links  ==
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* PLANTCYC : PWY-2541
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{{#set: direction=LEFT-TO-RIGHT}}
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* ARACYC:
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{{#set: ec number=EC-4.2.1.17}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-2541 PWY-2541]
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{{#set: gene associated=Tiso_gene_16145|Tiso_gene_6885|Tiso_gene_14262}}
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{{#set: taxonomic range=TAX-3398}}
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{{#set: in pathway=PWY-735}}
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{{#set: common name=plant sterol biosynthesis}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=10}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: total reaction=36}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: completion rate=28.0}}
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Latest revision as of 19:06, 21 March 2018

Reaction RXN-10704

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 OPC6-trans-2-enoyl-CoA[c] => 1 OPC6-3-hydroxyacyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 15 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10704&oldid=39479"