Difference between revisions of "TRANS-RXN0-623"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.90-RXN 2.7.1.90-RXN] == * direction: ** REVERSIBLE * common name: ** ORF * ec number: ** [htt...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-623 TRANS-RXN0-623] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_syntha...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.90-RXN 2.7.1.90-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-623 TRANS-RXN0-623] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
 +
** polyketide_synthase
 +
** long_chain_acyl-_synthetase
 
** ORF
 
** ORF
 +
** acyl-_synthetase
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.7.1.90 EC-2.7.1.90]
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[PPI]][c] '''+''' 1 [[FRUCTOSE-6P]][c] '''<=>''' 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c]
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** 1 [[CPD66-39]][e] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][e] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 diphosphate[c] '''+''' 1 &beta;-D-fructofuranose 6-phosphate[c] '''<=>''' 1 fructose 1,6-bisphosphate[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c]
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** 1 a 2,3,4-saturated fatty acid[e] '''+''' 1 coenzyme A[c] '''+''' 1 H+[e] '''+''' 1 ATP[c] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_596]]
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* Gene: [[Tiso_gene_7855]]
** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
***EC-NUMBER
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*** Assignment: EC-NUMBER
** EXPERIMENTAL_ANNOTATION
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* Gene: [[Tiso_gene_4191]]
***EC-NUMBER
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10876]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_135]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_136]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_500]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_348]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
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* Category: [[annotation]]
** [[pathwaytools]]:
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** Source: [[annotation-experimental_annotation]]
*** [[experimental_annotation]]
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*** Tool: [[pathwaytools]]
*** [[in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13613 13613]
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{{#set: common name=polyketide_synthase}}
* LIGAND-RXN:
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{{#set: common name=long_chain_acyl-_synthetase}}
** [http://www.genome.jp/dbget-bin/www_bget?R00764 R00764]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P21342 P21342]
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** [http://www.uniprot.org/uniprot/P29495 P29495]
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** [http://www.uniprot.org/uniprot/O83146 O83146]
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** [http://www.uniprot.org/uniprot/O84210 O84210]
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** [http://www.uniprot.org/uniprot/P21343 P21343]
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** [http://www.uniprot.org/uniprot/O51669 O51669]
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** [http://www.uniprot.org/uniprot/Q27651 Q27651]
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** [http://www.uniprot.org/uniprot/Q27659 Q27659]
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** [http://www.uniprot.org/uniprot/O81437 O81437]
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** [http://www.uniprot.org/uniprot/Q9STQ7 Q9STQ7]
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** [http://www.uniprot.org/uniprot/Q41140 Q41140]
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** [http://www.uniprot.org/uniprot/Q41141 Q41141]
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** [http://www.uniprot.org/uniprot/Q9M076 Q9M076]
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{{#set: direction=REVERSIBLE}}
+
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
{{#set: ec number=EC-2.7.1.90}}
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{{#set: common name=acyl-_synthetase}}
{{#set: gene associated=Tiso_gene_596}}
+
{{#set: ec number=EC-6.2.1.3}}
{{#set: in pathway=PWY-1042}}
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{{#set: gene associated=Tiso_gene_7855|Tiso_gene_4191|Tiso_gene_10876|Tiso_gene_135|Tiso_gene_136|Tiso_gene_13394|Tiso_gene_500|Tiso_gene_9394|Tiso_gene_348}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:06, 21 March 2018

Reaction TRANS-RXN0-623

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • ORF
    • acyl-_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a 2,3,4-saturated fatty acid[e] + 1 coenzyme A[c] + 1 H+[e] + 1 ATP[c] => 1 a 2,3,4-saturated fatty acyl CoA[c] + 1 diphosphate[c] + 1 AMP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links