Difference between revisions of "Tiso gene 348"

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(Created page with "Category:Gene == Gene Tiso_gene_348 == * right end position: ** 34578 * transcription direction: ** POSITIVE * left end position: ** 30916 * centisome position: ** 87.8994...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681] ==
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== Gene Tiso_gene_348 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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** 34578
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* common name:
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* transcription direction:
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** neurosporaxanthin biosynthesis
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** POSITIVE
 +
* left end position:
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** 30916
 +
* centisome position:
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** 87.89947   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''2''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[ACYLCOASYN-RXN]]
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* [[RXN-11989]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-11999]]
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*** Assignment: ec-number
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== Reaction(s) not found ==
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** Source: [[annotation-experimental_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11974 RXN-11974]
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11976 RXN-11976]
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* Reaction: [[LINOLENOYL-RXN]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11998 RXN-11998]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12000 RXN-12000]
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12001 RXN-12001]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[R223-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12184]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12978]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13290]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13614]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16380]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16389]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16393]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16401]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-16402]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-16415]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-16418]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-7904]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9623]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-9644]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9673]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-7238]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-7239]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-7248]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-469]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-477]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-480]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-483]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-484]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[TRANS-RXN0-623]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6920]]
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* [[P221-PWY]]
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* [[PWY-321]]
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* [[PWY-5972]]
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* [[PWY-5971]]
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* [[PWY-7033]]
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* [[PWY-5136]]
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* [[PWY66-389]]
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* [[PWY-7288]]
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* [[PWY-6733]]
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* [[PWY-7094]]
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* [[PWY66-391]]
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* [[FAO-PWY]]
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* [[PWY-1121]]
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* [[PWY-6873]]
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* [[PWY-5147]]
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* [[PWY-5143]]
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* [[PWY-5885]]
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* [[PWY-7724]]
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* [[PWY-6001]]
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* [[PWY-6000]]
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* [[PWY-7049]]
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* [[PWY66-387]]
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* [[PWY-5989]]
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* [[PWY-6803]]
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* [[PWY66-388]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33154}}
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{{#set: right end position=34578}}
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{{#set: common name=neurosporaxanthin biosynthesis}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: reaction found=2}}
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{{#set: left end position=30916}}
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{{#set: reaction not found=7}}
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{{#set: centisome position=87.89947    }}
−
{{#set: completion rate=29.0}}
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{{#set: reaction associated=ACYLCOASYN-RXN|LINOLENOYL-RXN|R223-RXN|RXN-12184|RXN-12978|RXN-13290|RXN-13614|RXN-16380|RXN-16389|RXN-16393|RXN-16401|RXN-16402|RXN-16415|RXN-16418|RXN-7904|RXN-9623|RXN-9644|RXN-9673|RXN0-7238|RXN0-7239|RXN0-7248|RXN66-469|RXN66-477|RXN66-480|RXN66-483|RXN66-484|TRANS-RXN0-623}}
 +
{{#set: pathway associated=PWY-6920|P221-PWY|PWY-321|PWY-5972|PWY-5971|PWY-7033|PWY-5136|PWY66-389|PWY-7288|PWY-6733|PWY-7094|PWY66-391|FAO-PWY|PWY-1121|PWY-6873|PWY-5147|PWY-5143|PWY-5885|PWY-7724|PWY-6001|PWY-6000|PWY-7049|PWY66-387|PWY-5989|PWY-6803|PWY66-388}}

Latest revision as of 19:06, 21 March 2018

Gene Tiso_gene_348

  • right end position:
    • 34578
  • transcription direction:
    • POSITIVE
  • left end position:
    • 30916
  • centisome position:
    • 87.89947
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_348&oldid=39512"