Difference between revisions of "GLUTDEG-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEG-PWY GLUTDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEG-PWY GLUTDEG-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** pyrroline-5-carboxylate_reductase
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** L-glutamate degradation II
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** ORF
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** ankyrin_repeat-containing_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
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* Synonym(s):
 
* Synonym(s):
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** L-aspartate degradation
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
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** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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* [[ASPAMINOTRANS-RXN]]
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* With common name(s):
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** 6 associated gene(s):
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** 1 NAD(P)H[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 2 H+[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
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*** [[Tiso_gene_17718]]
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*** [[Tiso_gene_6815]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_13538]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_15680]]
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* [[Tiso_gene_8625]]
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*** [[Tiso_gene_17809]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_12889]]
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***EC-NUMBER
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** 7 reconstruction source(s) associated:
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** EXPERIMENTAL_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_19254]]
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*** [[orthology-athaliana]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-synechocystis]]
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***EC-NUMBER
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*** [[manual-primary_network]]
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* [[Tiso_gene_17059]]
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*** [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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== Reaction(s) not found ==
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=ASPARTASE-RXN ASPARTASE-RXN]
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* [[Tiso_gene_20218]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ECOCYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLUTDEG-PWY GLUTDEG-PWY]
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** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=L-glutamate degradation II}}
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** [http://www.uniprot.org/uniprot/P32322 P32322]
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{{#set: common name=L-aspartate degradation}}
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** [http://www.uniprot.org/uniprot/P27771 P27771]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
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{{#set: total reaction=2}}
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** [http://www.uniprot.org/uniprot/P14383 P14383]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
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** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
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** [http://www.uniprot.org/uniprot/Q12740 Q12740]
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** [http://www.uniprot.org/uniprot/P22008 P22008]
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** [http://www.uniprot.org/uniprot/P54904 P54904]
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** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
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** [http://www.uniprot.org/uniprot/P17817 P17817]
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** [http://www.uniprot.org/uniprot/P32263 P32263]
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** [http://www.uniprot.org/uniprot/Q12641 Q12641]
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** [http://www.uniprot.org/uniprot/P46725 P46725]
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** [http://www.uniprot.org/uniprot/P74572 P74572]
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** [http://www.uniprot.org/uniprot/Q04708 Q04708]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyrroline-5-carboxylate_reductase}}
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{{#set: common name=ORF}}
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{{#set: common name=ankyrin_repeat-containing_protein}}
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{{#set: ec number=EC-1.5.1.2}}
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{{#set: gene associated=Tiso_gene_8625|Tiso_gene_19254|Tiso_gene_17059|Tiso_gene_20218}}
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{{#set: in pathway=PROSYN-PWY|ARG-PRO-PWY|PWY-6344|PWY-4981|PWY-3341}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:06, 21 March 2018

Pathway GLUTDEG-PWY

  • taxonomic range:
  • common name:
    • L-glutamate degradation II
  • Synonym(s):
    • L-aspartate degradation

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLUTDEG-PWY&oldid=39518"