Difference between revisions of "PWY-6122"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-320 RXN1G-320] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-320 RXN1G-320] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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* common name:
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** 5-aminoimidazole ribonucleotide biosynthesis II
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''5''' reactions in the full pathway
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** 1 [[R-3-hydroxyarachidoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[trans-delta2-arachidoyl-ACPs]][c]
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* [[AIRS-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a (3R)-3-hydroxyarachidoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans-eicos-2-enoyl-[acp][c]
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*** [[Tiso_gene_1369]]
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** 4 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[manual-primary_network]]
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* [[Tiso_gene_6884]]
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*** [[annotation-experimental_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** [[orthology-synechocystis]]
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***AUTOMATED-NAME-MATCH
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* [[FGAMSYN-RXN]]
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== Pathways  ==
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** 1 associated gene(s):
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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*** [[Tiso_gene_5865]]
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** '''86''' reactions found over '''182''' reactions in the full pathway
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** 4 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
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* [[manual]]:
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*** [[orthology-athaliana]]
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** [[primary_network]]
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*** [[annotation-experimental_annotation]]
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* [[annotation]]:
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*** [[manual-primary_network]]
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** [[pathwaytools]]:
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* [[GLYRIBONUCSYN-RXN]]
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*** [[experimental_annotation]]
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** 1 associated gene(s):
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*** [[in-silico_annotation]]
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*** [[Tiso_gene_1369]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[PRPPAMIDOTRANS-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1007]]
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*** [[Tiso_gene_9914]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GARTRANSFORMYL2-RXN GARTRANSFORMYL2-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: ec number=EC-4.2.1.59}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6122 PWY-6122]
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{{#set: gene associated=Tiso_gene_6884}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: in pathway=PWYG-321}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: reconstruction category=manual}}
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{{#set: common name=5-aminoimidazole ribonucleotide biosynthesis II}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reaction found=4}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=5}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=80.0}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:07, 21 March 2018

Pathway PWY-6122

  • taxonomic range:
  • common name:
    • 5-aminoimidazole ribonucleotide biosynthesis II
  • Synonym(s):

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6122&oldid=39570"