Difference between revisions of "PWY-4984"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15589 RXN-15589] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.8...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15589 RXN-15589] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
** [http://enzyme.expasy.org/EC/2.8.2.1 EC-2.8.2.1]
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* common name:
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** urea cycle
 
* Synonym(s):
 
* Synonym(s):
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** Krebs ornithine cycle
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** Krebs-Henseleit cycle
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''5''' reactions found over '''5''' reactions in the full pathway
** 1 [[PAPS]][c] '''+''' 1 [[CPD-14115]][c] '''<=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CPD-16825]][c] '''+''' 1 [[PROTON]][c]
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* [[ARGINASE-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 3'-phosphoadenylyl-sulfate[c] '''+''' 1 (S)-equol[c] '''<=>''' 1 adenosine 3',5'-bisphosphate[c] '''+''' 1 (S)-equol 4'-sulfate[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_4415]]
 
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** 4 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
* [[Tiso_gene_5505]]
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*** [[annotation-experimental_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
== Pathways  ==
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* [[ARGSUCCINLYA-RXN]]
== Reconstruction information  ==
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** 1 associated gene(s):
* [[orthology]]:
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*** [[Tiso_gene_2485]]
** [[pantograph]]:
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** 7 reconstruction source(s) associated:
*** [[esiliculosus]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[ARGSUCCINSYN-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_12592]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[ORNCARBAMTRANSFER-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_18444]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN-13202]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_4976]]
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*** [[Tiso_gene_4685]]
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*** [[Tiso_gene_4975]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-2}}
{{#set: ec number=EC-2.8.2.1}}
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{{#set: taxonomic range=TAX-2759}}
{{#set: gene associated=Tiso_gene_5505}}
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{{#set: common name=urea cycle}}
{{#set: in pathway=}}
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{{#set: common name=Krebs ornithine cycle|Krebs-Henseleit cycle}}
{{#set: reconstruction category=orthology}}
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{{#set: reaction found=5}}
{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=5}}
{{#set: reconstruction source=esiliculosus}}
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{{#set: completion rate=100.0}}

Latest revision as of 19:07, 21 March 2018

Pathway PWY-4984

  • taxonomic range:
  • common name:
    • urea cycle
  • Synonym(s):
    • Krebs ornithine cycle
    • Krebs-Henseleit cycle

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links