Difference between revisions of "RXN-15043"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15043 RXN-15043] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-acylglycerol-3-phosphate_...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15043 RXN-15043] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** glycolysis III (from glucose)
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** 1-acylglycerol-3-phosphate_o-acyltransferase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.51 EC-2.3.1.51]
 
* Synonym(s):
 
* Synonym(s):
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** anaerobic glycolysis
 
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** Embden-Meyerhof-Parnas pathway
 
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** EMP pathway
 
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** glycolysis III (glucokinase)
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''10''' reactions found over '''10''' reactions in the full pathway
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* With identifiers:
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* [[2PGADEHYDRAT-RXN]]
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** 1 [[OLEOYL-COA]][c] '''+''' 1 [[L-1-LYSOPHOSPHATIDATE]][c] '''=>''' 1 [[CPD-8268]][c] '''+''' 1 [[CO-A]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_14718]]
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** 1 oleoyl-CoA[c] '''+''' 1 1-oleyl-2-lyso-phosphatidate[c] '''=>''' 1 dioleoyl phosphatidate[c] '''+''' 1 coenzyme A[c]
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*** [[Tiso_gene_8720]]
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−
*** [[Tiso_gene_5619]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_13317]]
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Genes have been associated with this reaction based on different elements listed below.
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** 7 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_13959]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: EC-NUMBER
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*** [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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== Pathways  ==
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*** [[orthology-creinhardtii]]
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* [[PWY-7411]], phosphatidate biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7411 PWY-7411]
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* [[6PFRUCTPHOS-RXN]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** 2 associated gene(s):
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* [[PWY-7417]], phospholipid remodeling (phosphatidate, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7417 PWY-7417]
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*** [[Tiso_gene_5733]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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*** [[Tiso_gene_596]]
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== Reconstruction information  ==
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** 6 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
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*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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* [[F16ALDOLASE-RXN]]
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*** Tool: [[pathwaytools]]
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** 6 associated gene(s):
+
−
*** [[Tiso_gene_65]]
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−
*** [[Tiso_gene_9119]]
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−
*** [[Tiso_gene_9179]]
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−
*** [[Tiso_gene_12272]]
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−
*** [[Tiso_gene_14568]]
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−
*** [[Tiso_gene_9118]]
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** 5 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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−
* [[GAPOXNPHOSPHN-RXN]]
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−
** 5 associated gene(s):
+
−
*** [[Tiso_gene_20000]]
+
−
*** [[Tiso_gene_6766]]
+
−
*** [[Tiso_gene_10646]]
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−
*** [[Tiso_gene_3344]]
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−
*** [[Tiso_gene_235]]
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−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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−
* [[GLUCOKIN-RXN]]
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** 2 associated gene(s):
+
−
*** [[Tiso_gene_3107]]
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−
*** [[Tiso_gene_1303]]
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−
** 4 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[PEPDEPHOS-RXN]]
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−
** 4 associated gene(s):
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−
*** [[Tiso_gene_14504]]
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*** [[Tiso_gene_18206]]
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*** [[Tiso_gene_974]]
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*** [[Tiso_gene_14505]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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−
* [[PGLUCISOM-RXN]]
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** 1 associated gene(s):
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−
*** [[Tiso_gene_19480]]
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−
** 3 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PHOSGLYPHOS-RXN]]
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−
** 6 associated gene(s):
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−
*** [[Tiso_gene_3527]]
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−
*** [[Tiso_gene_18263]]
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−
*** [[Tiso_gene_12104]]
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−
*** [[Tiso_gene_3526]]
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*** [[Tiso_gene_14642]]
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*** [[Tiso_gene_18264]]
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** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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−
* [[RXN-15513]]
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−
** 8 associated gene(s):
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−
*** [[Tiso_gene_7201]]
+
−
*** [[Tiso_gene_9922]]
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−
*** [[Tiso_gene_2841]]
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−
*** [[Tiso_gene_14530]]
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−
*** [[Tiso_gene_9923]]
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−
*** [[Tiso_gene_16271]]
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−
*** [[Tiso_gene_2365]]
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*** [[Tiso_gene_14664]]
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** 2 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[annotation-in-silico_annotation]]
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−
* [[TRIOSEPISOMERIZATION-RXN]]
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−
** 4 associated gene(s):
+
−
*** [[Tiso_gene_20000]]
+
−
*** [[Tiso_gene_19961]]
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−
*** [[Tiso_gene_10646]]
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−
*** [[Tiso_gene_19962]]
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−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
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−
== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=1-acylglycerol-3-phosphate_o-acyltransferase}}
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{{#set: common name=glycolysis III (from glucose)}}
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{{#set: ec number=EC-2.3.1.51}}
−
{{#set: common name=anaerobic glycolysis|Embden-Meyerhof-Parnas pathway|EMP pathway|glycolysis III (glucokinase)}}
+
{{#set: gene associated=Tiso_gene_13959}}
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{{#set: reaction found=10}}
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{{#set: in pathway=PWY-7411|PWY-7417}}
−
{{#set: total reaction=10}}
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{{#set: reconstruction category=orthology|annotation}}
−
{{#set: completion rate=100.0}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:08, 21 March 2018

Reaction RXN-15043

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 1-acylglycerol-3-phosphate_o-acyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7411, phosphatidate biosynthesis (yeast): PWY-7411
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7417, phospholipid remodeling (phosphatidate, yeast): PWY-7417
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15043&oldid=39672"