Difference between revisions of "Tiso gene 16872"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] == * direction: ** LEFT-TO-RIGHT * common name: ** rieske_2fe-2sdomainiss ** t...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16872 == * right end position: ** 3524 * transcription direction: ** POSITIVE * left end position: ** 185 * centisome position: ** 4.540992...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] ==
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== Gene Tiso_gene_16872 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 3524
* common name:
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* transcription direction:
** rieske_2fe-2sdomainiss
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** POSITIVE
** tic55_component_of_chloroplast_import_machinery
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* left end position:
** isp_domain-containing_protein
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** 185
* ec number:
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* centisome position:
** [http://enzyme.expasy.org/EC/1.14.13.122 EC-1.14.13.122]
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** 4.540992   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[2.4.1.232-RXN]]
** 2 [[PROTON]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 2 [[NADPH]][c] '''=>''' 2 [[NADP]][c] '''+''' 3 [[WATER]][c] '''+''' 1 [[CPD-7014]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: ec-number
** 2 H+[c] '''+''' 2 oxygen[c] '''+''' 1 chlorophyllide a[c] '''+''' 2 NADPH[c] '''=>''' 2 NADP+[c] '''+''' 3 H2O[c] '''+''' 1 chlorophyllide b[c]
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* Reaction: [[RXN-5462]]
 
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** Source: [[annotation-in-silico_annotation]]
== Genes associated with this reaction  ==
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*** Assignment: ec-number
Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
* [[Tiso_gene_8091]]
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_152]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12611]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4002]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13817]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: right end position=3524}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22139 22139]
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{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
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{{#set: left end position=185}}
** [http://www.genome.jp/dbget-bin/www_bget?R10080 R10080]
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{{#set: centisome position=4.540992    }}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=2.4.1.232-RXN|RXN-5462}}
{{#set: common name=rieske_2fe-2sdomainiss}}
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{{#set: pathway associated=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
{{#set: common name=tic55_component_of_chloroplast_import_machinery}}
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{{#set: common name=isp_domain-containing_protein}}
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{{#set: ec number=EC-1.14.13.122}}
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{{#set: gene associated=Tiso_gene_8091|Tiso_gene_152|Tiso_gene_12611|Tiso_gene_4002|Tiso_gene_13817}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:08, 21 March 2018

Gene Tiso_gene_16872

  • right end position:
    • 3524
  • transcription direction:
    • POSITIVE
  • left end position:
    • 185
  • centisome position:
    • 4.540992
  • Synonym(s):

Reactions associated

Pathways associated

External links