Difference between revisions of "RXN-13398"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RNA-Ligase-L-lysine-adenylate RNA-Ligase-L-lysine-adenylate] == * common name: ** a [DNA ligase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] == * direction: ** LEFT-TO-RIGHT * common name: ** rieske_2fe-2sdomainiss ** t...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RNA-Ligase-L-lysine-adenylate RNA-Ligase-L-lysine-adenylate] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a [DNA ligase]-N6-(5'-adenylyl)-L-lysine
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** rieske_2fe-2sdomainiss
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** tic55_component_of_chloroplast_import_machinery
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** isp_domain-containing_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/1.14.13.122 EC-1.14.13.122]
 
* Synonym(s):
 
* Synonym(s):
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** a 5'-adenosyl [RNA ligase]-Nε-phosphono-L-lysine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-17926]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 2 [[PROTON]][c] '''+''' 2 [[NADPH]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[NADP]][c] '''+''' 1 [[CPD-7014]][c] '''+''' 3 [[WATER]][c]
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* [[RXN-17925]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 2 H+[c] '''+''' 2 NADPH[c] '''+''' 1 chlorophyllide a[c] '''+''' 2 oxygen[c] '''=>''' 2 NADP+[c] '''+''' 1 chlorophyllide b[c] '''+''' 3 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_13817]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_8091]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_12611]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_152]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4002]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a [DNA ligase]-N6-(5'-adenylyl)-L-lysine}}
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* RHEA:
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{{#set: common name=a 5'-adenosyl [RNA ligase]-Nε-phosphono-L-lysine}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22139 22139]
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{{#set: consumed by=RXN-17926}}
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* LIGAND-RXN:
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{{#set: produced by=RXN-17925}}
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** [http://www.genome.jp/dbget-bin/www_bget?R10080 R10080]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=rieske_2fe-2sdomainiss}}
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{{#set: common name=tic55_component_of_chloroplast_import_machinery}}
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{{#set: common name=isp_domain-containing_protein}}
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{{#set: ec number=EC-1.14.13.122}}
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{{#set: gene associated=Tiso_gene_13817|Tiso_gene_8091|Tiso_gene_12611|Tiso_gene_152|Tiso_gene_4002}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:08, 21 March 2018

Reaction RXN-13398

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • rieske_2fe-2sdomainiss
    • tic55_component_of_chloroplast_import_machinery
    • isp_domain-containing_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13398&oldid=39713"