Difference between revisions of "Tiso gene 6151"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydro...")
(Created page with "Category:Gene == Gene Tiso_gene_6151 == * right end position: ** 5949 * transcription direction: ** POSITIVE * left end position: ** 2888 * centisome position: ** 15.85158...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] ==
+
== Gene Tiso_gene_6151 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 5949
−
* common name:
+
* transcription direction:
−
** dihydrodipicolinate_synthase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/4.3.3.7 EC-4.3.3.7]
+
** 2888
 +
* centisome position:
 +
** 15.851584   
 
* Synonym(s):
 
* Synonym(s):
−
** dihydropicolinate synthetase
 
−
** dihydrodipicolinic acid synthase
 
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[2.1.1.127-RXN]]
−
** 1 [[PYRUVATE]][c] '''+''' 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''=>''' 1 [[CPD-14443]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
+
−
* With common name(s):
+
−
** 1 pyruvate[c] '''+''' 1 L-aspartate-semialdehyde[c] '''=>''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H+[c] '''+''' 1 H2O[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_14829]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
** Source: [[orthology-esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[manual]]
+
−
** Source: [[manual-primary_network]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: right end position=5949}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
+
{{#set: transcription direction=POSITIVE}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
+
{{#set: left end position=2888}}
−
* UNIPROT:
+
{{#set: centisome position=15.851584    }}
−
** [http://www.uniprot.org/uniprot/P43797 P43797]
+
{{#set: reaction associated=2.1.1.127-RXN}}
−
** [http://www.uniprot.org/uniprot/O26892 O26892]
+
−
** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
+
−
** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
+
−
** [http://www.uniprot.org/uniprot/P19808 P19808]
+
−
** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
+
−
** [http://www.uniprot.org/uniprot/O05969 O05969]
+
−
** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
+
−
** [http://www.uniprot.org/uniprot/Q04796 Q04796]
+
−
** [http://www.uniprot.org/uniprot/Q57695 Q57695]
+
−
** [http://www.uniprot.org/uniprot/O25657 O25657]
+
−
** [http://www.uniprot.org/uniprot/O67216 O67216]
+
−
** [http://www.uniprot.org/uniprot/O29352 O29352]
+
−
** [http://www.uniprot.org/uniprot/O84366 O84366]
+
−
** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
+
−
** [http://www.uniprot.org/uniprot/P63945 P63945]
+
−
** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
+
−
** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
+
−
** [http://www.uniprot.org/uniprot/Q43038 Q43038]
+
−
** [http://www.uniprot.org/uniprot/P49423 P49423]
+
−
** [http://www.uniprot.org/uniprot/Q55513 Q55513]
+
−
** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
+
−
** [http://www.uniprot.org/uniprot/Q42948 Q42948]
+
−
** [http://www.uniprot.org/uniprot/Q42940 Q42940]
+
−
** [http://www.uniprot.org/uniprot/O86841 O86841]
+
−
** [http://www.uniprot.org/uniprot/P24847 P24847]
+
−
** [http://www.uniprot.org/uniprot/P24846 P24846]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=dihydrodipicolinate_synthase}}
+
−
{{#set: ec number=EC-4.3.3.7}}
+
−
{{#set: common name=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}}
+
−
{{#set: gene associated=Tiso_gene_14829}}
+
−
{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:08, 21 March 2018

Gene Tiso_gene_6151

  • right end position:
    • 5949
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2888
  • centisome position:
    • 15.851584
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6151&oldid=39773"