Difference between revisions of "PWY-5826"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** diacylglycero...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
−
** diacylglycerol_kinase_catalytic_region
+
** hypoglycin biosynthesis
−
** diacylglycerol_kinase
+
−
** sphingosine_kinase_1
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.7.1.107 EC-2.7.1.107]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''4''' reactions found over '''14''' reactions in the full pathway
−
** 1 [[ATP]][c] '''+''' 1 [[DIACYLGLYCEROL]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c]
+
* [[RXN-15121]]
−
* With common name(s):
+
** 0 associated gene:
−
** 1 ATP[c] '''+''' 1 a 1,2-diacyl-sn-glycerol[c] '''=>''' 1 ADP[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 H+[c]
+
** 2 reconstruction source(s) associated:
−
 
+
*** [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** [[annotation-experimental_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-15122]]
−
* [[Tiso_gene_1163]]
+
** 3 associated gene(s):
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_8525]]
−
***EC-NUMBER
+
*** [[Tiso_gene_17207]]
−
* [[Tiso_gene_1420]]
+
*** [[Tiso_gene_12535]]
−
** IN-SILICO_ANNOTATION
+
** 3 reconstruction source(s) associated:
−
***EC-NUMBER
+
*** [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_14560]]
+
*** [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* [[RXN-15123]]
−
***EC-NUMBER
+
** 0 associated gene:
−
** [[pantograph]]-[[esiliculosus]]
+
** 2 reconstruction source(s) associated:
−
== Pathways  ==
+
*** [[annotation-experimental_annotation]]
−
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
+
*** [[annotation-in-silico_annotation]]
−
** '''7''' reactions found over '''16''' reactions in the full pathway
+
* [[RXN-9157]]
−
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
+
** 1 associated gene(s):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
*** [[Tiso_gene_12321]]
−
== Reconstruction information  ==
+
** 2 reconstruction source(s) associated:
−
* [[orthology]]:
+
*** [[annotation-in-silico_annotation]]
−
** [[pantograph]]:
+
*** [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
== Reaction(s) not found ==
−
* [[annotation]]:
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9167 RXN-9167]
−
** [[pathwaytools]]:
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9168 RXN-9168]
−
*** [[in-silico_annotation]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9169 RXN-9169]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9170 RXN-9170]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9171 RXN-9171]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9172 RXN-9172]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9173 RXN-9173]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9174 RXN-9174]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9175 RXN-9175]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9189 RXN-9189]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-3193}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10272 10272]
+
{{#set: common name=hypoglycin biosynthesis}}
−
* LIGAND-RXN:
+
{{#set: reaction found=4}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02240 R02240]
+
{{#set: total reaction=14}}
−
* UNIPROT:
+
{{#set: completion rate=29.0}}
−
** [http://www.uniprot.org/uniprot/Q01583 Q01583]
+
−
** [http://www.uniprot.org/uniprot/P49621 P49621]
+
−
** [http://www.uniprot.org/uniprot/P49619 P49619]
+
−
** [http://www.uniprot.org/uniprot/P51556 P51556]
+
−
** [http://www.uniprot.org/uniprot/Q9JTJ7 Q9JTJ7]
+
−
** [http://www.uniprot.org/uniprot/Q9CGK9 Q9CGK9]
+
−
** [http://www.uniprot.org/uniprot/Q9PIN8 Q9PIN8]
+
−
** [http://www.uniprot.org/uniprot/O08560 O08560]
+
−
** [http://www.uniprot.org/uniprot/P0ABN1 P0ABN1]
+
−
** [http://www.uniprot.org/uniprot/P20192 P20192]
+
−
** [http://www.uniprot.org/uniprot/P23743 P23743]
+
−
** [http://www.uniprot.org/uniprot/Q06119 Q06119]
+
−
** [http://www.uniprot.org/uniprot/Q03603 Q03603]
+
−
** [http://www.uniprot.org/uniprot/Q39017 Q39017]
+
−
** [http://www.uniprot.org/uniprot/Q09103 Q09103]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=diacylglycerol_kinase_catalytic_region}}
+
−
{{#set: common name=diacylglycerol_kinase}}
+
−
{{#set: common name=sphingosine_kinase_1}}
+
−
{{#set: ec number=EC-2.7.1.107}}
+
−
{{#set: gene associated=Tiso_gene_1163|Tiso_gene_1420|Tiso_gene_14560}}
+
−
{{#set: in pathway=PWY-7817|PWY-7039}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:09, 21 March 2018

Pathway PWY-5826

  • taxonomic range:
  • common name:
    • hypoglycin biosynthesis
  • Synonym(s):

Reaction(s) found

4 reactions found over 14 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5826&oldid=39785"