Difference between revisions of "RXN-11919"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-275...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11919 RXN-11919] == * direction: ** LEFT-TO-RIGHT * common name: ** (2E)-5-methylhexa-2,4-dieno...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11919 RXN-11919] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** L-leucine degradation I
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** (2E)-5-methylhexa-2,4-dienoyl-CoA hydratase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1 EC-4.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-12904]][c] '''=>''' 1 [[CPD-12905]][c]
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** 0 associated gene:
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* With common name(s):
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** 2 reconstruction source(s) associated:
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** 1 H2O[c] '''+''' 1 (2E)-5-methylhexa-2,4-dienoyl-CoA[c] '''=>''' 1 3-hydroxy-5-methylhex-4-enoyl-CoA[c]
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 associated gene(s):
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* Gene: [[Tiso_gene_14257]]
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*** [[Tiso_gene_18403]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_14984]]
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== Pathways  ==
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** 5 reconstruction source(s) associated:
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* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
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*** [[annotation-experimental_annotation]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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*** [[manual-primary_network]]
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== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
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* Category: [[orthology]]
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*** [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* [[HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_3769]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14499]]
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*** [[Tiso_gene_5029]]
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*** [[Tiso_gene_10675]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[annotation-experimental_annotation]]
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* [[METHYLGLUTACONYL-COA-HYDRATASE-RXN]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[RXN0-2301]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18542]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08093 R08093]
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{{#set: common name=L-leucine degradation I}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=6}}
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{{#set: common name=(2E)-5-methylhexa-2,4-dienoyl-CoA hydratase}}
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{{#set: total reaction=6}}
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{{#set: ec number=EC-4.2.1}}
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{{#set: completion rate=100.0}}
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{{#set: gene associated=Tiso_gene_14257}}
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{{#set: in pathway=PWY-6672}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:09, 21 March 2018

Reaction RXN-11919

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • (2E)-5-methylhexa-2,4-dienoyl-CoA hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 (2E)-5-methylhexa-2,4-dienoyl-CoA[c] => 1 3-hydroxy-5-methylhex-4-enoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6672, cis-genanyl-CoA degradation: PWY-6672
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11919&oldid=39788"