Difference between revisions of "Gal-Gal-Xyl-Proteins"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] == * direction: ** L...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Gal-Gal-Xyl-Proteins Gal-Gal-Xyl-Proteins] == * common name: ** a [protein]-3-O-(β-D-galac...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Gal-Gal-Xyl-Proteins Gal-Gal-Xyl-Proteins] ==
−
* direction:
+
−
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
−
** mrna_capguanine-n7methyltransferase
+
** a [protein]-3-O-(β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine
−
** mrna_cap_guanine-n7_methyltransferase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.1.1.56 EC-2.1.1.56]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** 3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[protein]
 +
** 3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[core protein]
 +
** β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[proteoglycan]
 +
** β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein]
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[2.4.1.135-RXN]]
−
** 1 [[G5-pppR-mRNAs]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[m7G5-pppR-mRNAs]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 a 5'-(5'-triphosphoguanosine)-purine-[mRNA][c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 a 5'-(N7-methyl 5'-triphosphoguanosine)-(purine-ribonucleotide)-[mRNA][c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_5135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_2105]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_5134]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-7375]], mRNA capping I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7375 PWY-7375]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: common name=a [protein]-3-O-(β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03805 R03805]
+
{{#set: common name=3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[protein]|3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[core protein]|β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[proteoglycan]|β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein]}}
−
* UNIPROT:
+
{{#set: consumed by=2.4.1.135-RXN}}
−
** [http://www.uniprot.org/uniprot/Q66121 Q66121]
+
−
** [http://www.uniprot.org/uniprot/Q9I8S2 Q9I8S2]
+
−
** [http://www.uniprot.org/uniprot/P03588 P03588]
+
−
** [http://www.uniprot.org/uniprot/Q00020 Q00020]
+
−
** [http://www.uniprot.org/uniprot/P06011 P06011]
+
−
** [http://www.uniprot.org/uniprot/P20122 P20122]
+
−
** [http://www.uniprot.org/uniprot/P28726 P28726]
+
−
** [http://www.uniprot.org/uniprot/P28931 P28931]
+
−
** [http://www.uniprot.org/uniprot/P04298 P04298]
+
−
** [http://www.uniprot.org/uniprot/P04318 P04318]
+
−
** [http://www.uniprot.org/uniprot/P20979 P20979]
+
−
** [http://www.uniprot.org/uniprot/Q98257 Q98257]
+
−
** [http://www.uniprot.org/uniprot/Q98268 Q98268]
+
−
** [http://www.uniprot.org/uniprot/P03589 P03589]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=mrna_capguanine-n7methyltransferase}}
+
−
{{#set: common name=mrna_cap_guanine-n7_methyltransferase}}
+
−
{{#set: ec number=EC-2.1.1.56}}
+
−
{{#set: gene associated=Tiso_gene_5135|Tiso_gene_2105|Tiso_gene_5134}}
+
−
{{#set: in pathway=PWY-7375}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:09, 21 March 2018

Metabolite Gal-Gal-Xyl-Proteins

  • common name:
    • a [protein]-3-O-(β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine
  • Synonym(s):
    • 3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[protein]
    • 3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[core protein]
    • β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[proteoglycan]
    • β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein]

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"a [protein]-3-O-(β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine" cannot be used as a page name in this wiki.
  • "3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[protein" cannot be used as a page name in this wiki.
  • "3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[core protein" cannot be used as a page name in this wiki.
  • "β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[proteoglycan" cannot be used as a page name in this wiki.
  • "β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein" cannot be used as a page name in this wiki.
Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Gal-Gal-Xyl-Proteins&oldid=39798"