Difference between revisions of "SPERMIDINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] == * direction: ** LEFT-TO-RIGHT * common name: ** mpbq_msbq_methyltransferase *...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SPERMIDINE SPERMIDINE] == * smiles: ** C([N+])CC[N+]CCCC[N+] * common name: ** spermidine * inc...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SPERMIDINE SPERMIDINE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C([N+])CC[N+]CCCC[N+]
 
* common name:
 
* common name:
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** mpbq_msbq_methyltransferase
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** spermidine
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.1.1.295 EC-2.1.1.295]
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** InChIKey=ATHGHQPFGPMSJY-UHFFFAOYSA-Q
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* molecular weight:
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** 148.271   
 
* Synonym(s):
 
* Synonym(s):
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** N-(3-aminopropyl)butane-1,4-diamine
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[SPERMINE-SYNTHASE-RXN]]
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** 1 [[MPBQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[DMPBQ]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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* [[SPMDtmi]]
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* With common name(s):
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* [[RXN-13414]]
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** 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 2,3-dimethyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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== Reaction(s) known to produce the compound ==
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* [[APAPT]]
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== Genes associated with this reaction  ==
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* [[SPMDtmi]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_11392]]
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* [[SPERMIDINESYN-RXN]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2596]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* CAS : 124-20-9
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** [http://www.genome.jp/dbget-bin/www_bget?R07501 R07501]
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* BIGG : spmd
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=mpbq_msbq_methyltransferase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6992097 6992097]
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{{#set: ec number=EC-2.1.1.295}}
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* HMDB : HMDB01257
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{{#set: gene associated=Tiso_gene_11392|Tiso_gene_2596}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-1422}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00315 C00315]
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{{#set: reconstruction category=orthology}}
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* CHEMSPIDER:
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{{#set: reconstruction tool=pantograph}}
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** [http://www.chemspider.com/Chemical-Structure.5360248.html 5360248]
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
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* CHEBI:
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{{#set: reconstruction category=annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57834 57834]
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{{#set: reconstruction tool=pathwaytools}}
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* METABOLIGHTS : MTBLC57834
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: smiles=C([N+])CC[N+]CCCC[N+]}}
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{{#set: common name=spermidine}}
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{{#set: inchi key=InChIKey=ATHGHQPFGPMSJY-UHFFFAOYSA-Q}}
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{{#set: molecular weight=148.271    }}
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{{#set: common name=N-(3-aminopropyl)butane-1,4-diamine}}
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{{#set: consumed by=SPERMINE-SYNTHASE-RXN|SPMDtmi|RXN-13414}}
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{{#set: produced by=APAPT|SPMDtmi}}
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{{#set: reversible reaction associated=SPERMIDINESYN-RXN}}

Latest revision as of 19:09, 21 March 2018

Metabolite SPERMIDINE

  • smiles:
    • C([N+])CC[N+]CCCC[N+]
  • common name:
    • spermidine
  • inchi key:
    • InChIKey=ATHGHQPFGPMSJY-UHFFFAOYSA-Q
  • molecular weight:
    • 148.271
  • Synonym(s):
    • N-(3-aminopropyl)butane-1,4-diamine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 124-20-9
  • BIGG : spmd
  • PUBCHEM:
  • HMDB : HMDB01257
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC57834
"C([N+])CC[N+]CCCC[N+" cannot be used as a page name in this wiki.




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