Difference between revisions of "D-XYLULOSE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] == * direction: ** L...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-XYLULOSE D-XYLULOSE] == * smiles: ** C(O)C(O)C(O)C(=O)CO * common name: ** D-xylulose * inchi...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-XYLULOSE D-XYLULOSE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(O)C(O)C(O)C(=O)CO
 
* common name:
 
* common name:
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** mrna_capguanine-n7methyltransferase
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** D-xylulose
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** mrna_cap_guanine-n7_methyltransferase
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* inchi key:
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* ec number:
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** InChIKey=ZAQJHHRNXZUBTE-WUJLRWPWSA-N
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** [http://enzyme.expasy.org/EC/2.1.1.56 EC-2.1.1.56]
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* molecular weight:
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** 150.131   
 
* Synonym(s):
 
* Synonym(s):
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** xylulose
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** D-threo-pentulose
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[XYLULOKIN-RXN]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[G5-pppR-mRNAs]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[m7G5-pppR-mRNAs]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 a 5'-(5'-triphosphoguanosine)-purine-[mRNA][c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 a 5'-(N7-methyl 5'-triphosphoguanosine)-(purine-ribonucleotide)-[mRNA][c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5134]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2105]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7375]], mRNA capping I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7375 PWY-7375]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* CAS : 551-84-8
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** [http://www.genome.jp/dbget-bin/www_bget?R03805 R03805]
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* BIGG : xylu__D
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* UNIPROT:
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* DRUGBANK : DB03947
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** [http://www.uniprot.org/uniprot/Q66121 Q66121]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q9I8S2 Q9I8S2]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5289590 5289590]
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** [http://www.uniprot.org/uniprot/P03588 P03588]
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* HMDB : HMDB01644
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** [http://www.uniprot.org/uniprot/Q00020 Q00020]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P06011 P06011]
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** [http://www.genome.jp/dbget-bin/www_bget?C00310 C00310]
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** [http://www.uniprot.org/uniprot/P20122 P20122]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P28726 P28726]
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** [http://www.chemspider.com/Chemical-Structure.4451524.html 4451524]
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** [http://www.uniprot.org/uniprot/P28931 P28931]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P04298 P04298]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17140 17140]
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** [http://www.uniprot.org/uniprot/P04318 P04318]
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* METABOLIGHTS : MTBLC17140
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** [http://www.uniprot.org/uniprot/P20979 P20979]
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{{#set: smiles=C(O)C(O)C(O)C(=O)CO}}
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** [http://www.uniprot.org/uniprot/Q98257 Q98257]
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{{#set: common name=D-xylulose}}
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** [http://www.uniprot.org/uniprot/Q98268 Q98268]
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{{#set: inchi key=InChIKey=ZAQJHHRNXZUBTE-WUJLRWPWSA-N}}
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** [http://www.uniprot.org/uniprot/P03589 P03589]
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{{#set: molecular weight=150.131    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=xylulose|D-threo-pentulose}}
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{{#set: common name=mrna_capguanine-n7methyltransferase}}
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{{#set: consumed by=XYLULOKIN-RXN}}
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{{#set: common name=mrna_cap_guanine-n7_methyltransferase}}
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{{#set: ec number=EC-2.1.1.56}}
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{{#set: gene associated=Tiso_gene_5135|Tiso_gene_5134|Tiso_gene_2105}}
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{{#set: in pathway=PWY-7375}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:09, 21 March 2018

Metabolite D-XYLULOSE

  • smiles:
    • C(O)C(O)C(O)C(=O)CO
  • common name:
    • D-xylulose
  • inchi key:
    • InChIKey=ZAQJHHRNXZUBTE-WUJLRWPWSA-N
  • molecular weight:
    • 150.131
  • Synonym(s):
    • xylulose
    • D-threo-pentulose

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 551-84-8
  • BIGG : xylu__D
  • DRUGBANK : DB03947
  • PUBCHEM:
  • HMDB : HMDB01644
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC17140




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