Difference between revisions of "PWY-6281"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] == * direction: ** L...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
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** mrna_capguanine-n7methyltransferase
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** L-selenocysteine biosynthesis II (archaea and eukaryotes)
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** mrna_cap_guanine-n7_methyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.56 EC-2.1.1.56]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[G5-pppR-mRNAs]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[m7G5-pppR-mRNAs]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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* [[2.7.9.3-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 a 5'-(5'-triphosphoguanosine)-purine-[mRNA][c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 a 5'-(N7-methyl 5'-triphosphoguanosine)-(purine-ribonucleotide)-[mRNA][c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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*** [[Tiso_gene_5669]]
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*** [[Tiso_gene_5668]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_14608]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[Tiso_gene_5135]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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* [[RXN-10038]]
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* [[Tiso_gene_2105]]
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** 0 associated gene:
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** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_5134]]
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* [[RXN-10039]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_16385]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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* [[PWY-7375]], mRNA capping I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7375 PWY-7375]
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*** [[annotation-in-silico_annotation]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* [[RXN0-2161]]
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* [[annotation]]:
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** 4 associated gene(s):
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** [[pathwaytools]]:
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*** [[Tiso_gene_587]]
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*** [[in-silico_annotation]]
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*** [[Tiso_gene_10015]]
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*** [[Tiso_gene_1682]]
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*** [[Tiso_gene_1684]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* LIGAND-MAP:
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** [http://www.genome.jp/dbget-bin/www_bget?R03805 R03805]
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** [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
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* UNIPROT:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.uniprot.org/uniprot/Q66121 Q66121]
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.uniprot.org/uniprot/Q9I8S2 Q9I8S2]
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{{#set: common name=L-selenocysteine biosynthesis II (archaea and eukaryotes)}}
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** [http://www.uniprot.org/uniprot/P03588 P03588]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/Q00020 Q00020]
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/P06011 P06011]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P20122 P20122]
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** [http://www.uniprot.org/uniprot/P28726 P28726]
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** [http://www.uniprot.org/uniprot/P28931 P28931]
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** [http://www.uniprot.org/uniprot/P04298 P04298]
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** [http://www.uniprot.org/uniprot/P04318 P04318]
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** [http://www.uniprot.org/uniprot/P20979 P20979]
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** [http://www.uniprot.org/uniprot/Q98257 Q98257]
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** [http://www.uniprot.org/uniprot/Q98268 Q98268]
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** [http://www.uniprot.org/uniprot/P03589 P03589]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=mrna_capguanine-n7methyltransferase}}
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{{#set: common name=mrna_cap_guanine-n7_methyltransferase}}
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{{#set: ec number=EC-2.1.1.56}}
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{{#set: gene associated=Tiso_gene_5135|Tiso_gene_2105|Tiso_gene_5134}}
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{{#set: in pathway=PWY-7375}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:09, 21 March 2018

Pathway PWY-6281

  • taxonomic range:
  • common name:
    • L-selenocysteine biosynthesis II (archaea and eukaryotes)
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6281&oldid=39830"