Difference between revisions of "ASPAMINOTRANS-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14120 RXN-14120] == * direction: ** REVERSIBLE * common name: ** ORF ** nucleoside_diphosphate_...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPAMINOTRANS-RXN ASPAMINOTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** aminotransfera...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPAMINOTRANS-RXN ASPAMINOTRANS-RXN] == |
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
* common name: | * common name: | ||
− | ** | + | ** aminotransferase |
− | ** | + | ** aspartate_aminotransferase |
− | + | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[L-ASPARTATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[OXALACETIC_ACID]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 L-aspartate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 oxaloacetate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * Gene: [[Tiso_gene_17718]] |
− | ** | + | ** Source: [[annotation-experimental_annotation]] |
− | ***EC-NUMBER | + | *** Assignment: EC-NUMBER |
− | * [[ | + | ** Source: [[orthology-athaliana]] |
− | ** | + | ** Source: [[orthology-athaliana]] |
− | *** | + | ** Source: [[orthology-athaliana]] |
− | * [[ | + | ** Source: [[orthology-esiliculosus]] |
− | ** | + | * Gene: [[Tiso_gene_6815]] |
− | ***EC-NUMBER | + | ** Source: [[annotation-in-silico_annotation]] |
− | * [[ | + | *** Assignment: EC-NUMBER |
− | + | ** Source: [[annotation-experimental_annotation]] | |
− | ***EC-NUMBER | + | *** Assignment: EC-NUMBER |
− | * [[ | + | ** Source: [[orthology-synechocystis]] |
− | ** | + | ** Source: [[orthology-creinhardtii]] |
− | *** | + | * Gene: [[Tiso_gene_13538]] |
− | * [[ | + | ** Source: [[orthology-esiliculosus]] |
− | ** | + | * Gene: [[Tiso_gene_15680]] |
− | *** | + | ** Source: [[orthology-esiliculosus]] |
− | ** | + | * Gene: [[Tiso_gene_17809]] |
− | * | + | ** Source: [[annotation-in-silico_annotation]] |
− | * | + | *** Assignment: AUTOMATED-NAME-MATCH |
− | ** [[ | + | * Gene: [[Tiso_gene_12889]] |
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
+ | * [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383] | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[ASPARTATE-DEG1-PWY]], L-aspartate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE-DEG1-PWY ASPARTATE-DEG1-PWY] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[ASPARTATESYN-PWY]], L-aspartate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATESYN-PWY ASPARTATESYN-PWY] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117] | ||
+ | ** '''7''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[GLUTDEG-PWY]], L-glutamate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEG-PWY GLUTDEG-PWY] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[MALATE-ASPARTATE-SHUTTLE-PWY]], L-aspartate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=MALATE-ASPARTATE-SHUTTLE-PWY MALATE-ASPARTATE-SHUTTLE-PWY] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[orthology]]: | + | * Category: [[orthology]] |
− | ** [[pantograph]]: | + | ** Source: [[orthology-athaliana]] |
− | *** [[esiliculosus]] | + | *** Tool: [[pantograph]] |
− | *** [[ | + | ** Source: [[orthology-creinhardtii]] |
− | * [[annotation]]: | + | *** Tool: [[pantograph]] |
− | ** [[pathwaytools]] | + | ** Source: [[orthology-synechocystis]] |
− | ** | + | *** Tool: [[pantograph]] |
− | *** [[ | + | ** Source: [[orthology-esiliculosus]] |
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-primary_network]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21824 21824] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00355 R00355] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q7LZ21 Q7LZ21] | ||
+ | ** [http://www.uniprot.org/uniprot/P08906 P08906] | ||
+ | ** [http://www.uniprot.org/uniprot/P12343 P12343] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06191 Q06191] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02635 Q02635] | ||
+ | ** [http://www.uniprot.org/uniprot/Q60317 Q60317] | ||
+ | ** [http://www.uniprot.org/uniprot/O28151 O28151] | ||
+ | ** [http://www.uniprot.org/uniprot/O67781 O67781] | ||
+ | ** [http://www.uniprot.org/uniprot/P08907 P08907] | ||
+ | ** [http://www.uniprot.org/uniprot/P12345 P12345] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X0Y2 Q9X0Y2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PPF7 Q9PPF7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JVS3 Q9JVS3] | ||
+ | ** [http://www.uniprot.org/uniprot/P53001 P53001] | ||
+ | ** [http://www.uniprot.org/uniprot/P96847 P96847] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9K0P5 Q9K0P5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X224 Q9X224] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Y9P0 Q9Y9P0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RWP3 Q9RWP3] | ||
+ | ** [http://www.uniprot.org/uniprot/O66737 O66737] | ||
+ | ** [http://www.uniprot.org/uniprot/O28650 O28650] | ||
+ | ** [http://www.uniprot.org/uniprot/O30304 O30304] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEK7 Q9CEK7] | ||
+ | ** [http://www.uniprot.org/uniprot/O27916 O27916] | ||
+ | ** [http://www.uniprot.org/uniprot/O05237 O05237] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9YE99 Q9YE99] | ||
+ | ** [http://www.uniprot.org/uniprot/O25383 O25383] | ||
+ | ** [http://www.uniprot.org/uniprot/O27638 O27638] | ||
+ | ** [http://www.uniprot.org/uniprot/O96142 O96142] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZLG5 Q9ZLG5] | ||
+ | ** [http://www.uniprot.org/uniprot/P00507 P00507] | ||
+ | ** [http://www.uniprot.org/uniprot/P44425 P44425] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59569 Q59569] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59197 Q59197] | ||
+ | ** [http://www.uniprot.org/uniprot/P37833 P37833] | ||
+ | ** [http://www.uniprot.org/uniprot/O48599 O48599] | ||
+ | ** [http://www.uniprot.org/uniprot/O33822 O33822] | ||
+ | ** [http://www.uniprot.org/uniprot/P05201 P05201] | ||
+ | ** [http://www.uniprot.org/uniprot/P05202 P05202] | ||
+ | ** [http://www.uniprot.org/uniprot/P14909 P14909] | ||
+ | ** [http://www.uniprot.org/uniprot/P17174 P17174] | ||
+ | ** [http://www.uniprot.org/uniprot/P33097 P33097] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43057 Q43057] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43305 Q43305] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42794 Q42794] | ||
+ | ** [http://www.uniprot.org/uniprot/P12344 P12344] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01802 Q01802] | ||
+ | ** [http://www.uniprot.org/uniprot/Q40325 Q40325] | ||
+ | ** [http://www.uniprot.org/uniprot/P36692 P36692] | ||
+ | ** [http://www.uniprot.org/uniprot/P28011 P28011] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42391 Q42391] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9L0L5 Q9L0L5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q53951 Q53951] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42803 Q42803] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42425 Q42425] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55128 Q55128] | ||
+ | ** [http://www.uniprot.org/uniprot/P72859 P72859] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55453 Q55453] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55679 Q55679] | ||
+ | ** [http://www.uniprot.org/uniprot/O48598 O48598] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42991 Q42991] | ||
+ | ** [http://www.uniprot.org/uniprot/P46248 P46248] | ||
+ | ** [http://www.uniprot.org/uniprot/O48548 O48548] | ||
+ | ** [http://www.uniprot.org/uniprot/Q60013 Q60013] | ||
+ | ** [http://www.uniprot.org/uniprot/P28734 P28734] | ||
+ | ** [http://www.uniprot.org/uniprot/Q17994 Q17994] | ||
+ | ** [http://www.uniprot.org/uniprot/Q17983 Q17983] | ||
+ | ** [http://www.uniprot.org/uniprot/Q22066 Q22066] | ||
+ | ** [http://www.uniprot.org/uniprot/Q22067 Q22067] | ||
+ | ** [http://www.uniprot.org/uniprot/O01804 O01804] | ||
+ | ** [http://www.uniprot.org/uniprot/O54170 O54170] | ||
+ | ** [http://www.uniprot.org/uniprot/O42652 O42652] | ||
+ | ** [http://www.uniprot.org/uniprot/O94320 O94320] | ||
+ | ** [http://www.uniprot.org/uniprot/P46644 P46644] | ||
+ | ** [http://www.uniprot.org/uniprot/P00504 P00504] | ||
+ | ** [http://www.uniprot.org/uniprot/P00508 P00508] | ||
+ | ** [http://www.uniprot.org/uniprot/P00509 P00509] | ||
+ | ** [http://www.uniprot.org/uniprot/P00505 P00505] | ||
+ | ** [http://www.uniprot.org/uniprot/P00503 P00503] | ||
+ | ** [http://www.uniprot.org/uniprot/P00506 P00506] | ||
+ | ** [http://www.uniprot.org/uniprot/P26563 P26563] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
− | {{#set: common name= | + | {{#set: common name=aminotransferase}} |
− | {{#set: common name= | + | {{#set: common name=aspartate_aminotransferase}} |
− | + | {{#set: ec number=EC-2.6.1.1}} | |
− | {{#set: ec number=EC-2. | + | {{#set: gene associated=Tiso_gene_17718|Tiso_gene_6815|Tiso_gene_13538|Tiso_gene_15680|Tiso_gene_17809|Tiso_gene_12889}} |
− | {{#set: gene associated= | + | {{#set: in pathway=PWY-5913|PWY-7383|ASPARTATE-DEG1-PWY|ASPARTATESYN-PWY|PWY-7117|GLUTDEG-PWY|PWY-7115|MALATE-ASPARTATE-SHUTTLE-PWY|ASPARAGINE-DEG1-PWY-1}} |
− | {{#set: in pathway=}} | + | {{#set: reconstruction category=orthology|manual|annotation}} |
− | {{#set: reconstruction category=orthology | + | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}} |
− | + | {{#set: reconstruction tool=pantograph|pathwaytools}} | |
− | {{#set: reconstruction source=esiliculosus|athaliana | + | |
− | + | ||
− | {{#set: reconstruction tool=pathwaytools | + | |
− | + |
Latest revision as of 19:09, 21 March 2018
Contents
Reaction ASPAMINOTRANS-RXN
- direction:
- REVERSIBLE
- common name:
- aminotransferase
- aspartate_aminotransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-ASPARTATE[c] + 1 2-KETOGLUTARATE[c] <=> 1 GLT[c] + 1 OXALACETIC_ACID[c]
- With common name(s):
- 1 L-aspartate[c] + 1 2-oxoglutarate[c] <=> 1 L-glutamate[c] + 1 oxaloacetate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_17718
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: orthology-athaliana
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_6815
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-synechocystis
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_13538
- Source: orthology-esiliculosus
- Gene: Tiso_gene_15680
- Source: orthology-esiliculosus
- Gene: Tiso_gene_17809
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_12889
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
- 9 reactions found over 11 reactions in the full pathway
- PWY-7383, anaerobic energy metabolism (invertebrates, cytosol): PWY-7383
- 5 reactions found over 7 reactions in the full pathway
- ASPARTATE-DEG1-PWY, L-aspartate degradation I: ASPARTATE-DEG1-PWY
- 1 reactions found over 1 reactions in the full pathway
- ASPARTATESYN-PWY, L-aspartate biosynthesis: ASPARTATESYN-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
- 7 reactions found over 10 reactions in the full pathway
- GLUTDEG-PWY, L-glutamate degradation II: GLUTDEG-PWY
- 1 reactions found over 2 reactions in the full pathway
- PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
- 7 reactions found over 9 reactions in the full pathway
- MALATE-ASPARTATE-SHUTTLE-PWY, L-aspartate degradation II: MALATE-ASPARTATE-SHUTTLE-PWY
- 2 reactions found over 2 reactions in the full pathway
- ASPARAGINE-DEG1-PWY-1, L-asparagine degradation III (mammalian): ASPARAGINE-DEG1-PWY-1
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
- Q7LZ21
- P08906
- P12343
- Q06191
- Q02635
- Q60317
- O28151
- O67781
- P08907
- P12345
- Q9X0Y2
- Q9PPF7
- Q9JVS3
- P53001
- P96847
- Q9K0P5
- Q9X224
- Q9Y9P0
- Q9RWP3
- O66737
- O28650
- O30304
- Q9CEK7
- O27916
- O05237
- Q9YE99
- O25383
- O27638
- O96142
- Q9ZLG5
- P00507
- P44425
- Q59569
- Q59197
- P37833
- O48599
- O33822
- P05201
- P05202
- P14909
- P17174
- P33097
- Q43057
- Q43305
- Q42794
- P12344
- Q01802
- Q40325
- P36692
- P28011
- Q42391
- Q9L0L5
- Q53951
- Q42803
- Q42425
- Q55128
- P72859
- Q55453
- Q55679
- O48598
- Q42991
- P46248
- O48548
- Q60013
- P28734
- Q17994
- Q17983
- Q22066
- Q22067
- O01804
- O54170
- O42652
- O94320
- P46644
- P00504
- P00508
- P00509
- P00505
- P00503
- P00506
- P26563