Difference between revisions of "PWY-7102"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1224 RXN-1224] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1224 RXN-1224] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
* ec number:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
** [http://enzyme.expasy.org/EC/2.4.1.M2 EC-2.4.1.M2]
+
* common name:
 +
** bisabolene biosynthesis (engineered)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''3''' reactions found over '''6''' reactions in the full pathway
** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[UDP-SULFOQUINOVOSE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[SULFOQUINOVOSYLDIACYLGLYCEROL]][c] '''+''' 1 [[UDP]][c]
+
* [[FPPSYN-RXN]]
* With common name(s):
+
** 1 associated gene(s):
** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 UDP-α-D-sulfoquinovopyranose[c] '''=>''' 1 H+[c] '''+''' 1 an 6-sulfo-α-D-quinovosyl diacylglycerol[c] '''+''' 1 UDP[c]
+
*** [[Tiso_gene_16284]]
 
+
** 4 reconstruction source(s) associated:
== Genes associated with this reaction  ==
+
*** [[orthology-athaliana]]
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-synechocystis]]
* [[Tiso_gene_7966]]
+
*** [[orthology-esiliculosus]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[manual-primary_network]]
* [[Tiso_gene_17894]]
+
* [[GPPSYN-RXN]]
** [[pantograph]]-[[esiliculosus]]
+
** 9 associated gene(s):
* [[Tiso_gene_12341]]
+
*** [[Tiso_gene_19542]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_18201]]
* [[Tiso_gene_11792]]
+
*** [[Tiso_gene_16284]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_2848]]
* [[Tiso_gene_9428]]
+
*** [[Tiso_gene_1035]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_4719]]
* [[Tiso_gene_10734]]
+
*** [[Tiso_gene_11582]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_13582]]
* [[Tiso_gene_412]]
+
*** [[Tiso_gene_10317]]
** [[pantograph]]-[[esiliculosus]]
+
** 5 reconstruction source(s) associated:
* [[Tiso_gene_3385]]
+
*** [[orthology-athaliana]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-creinhardtii]]
* [[Tiso_gene_19034]]
+
*** [[orthology-synechocystis]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-esiliculosus]]
* [[Tiso_gene_10863]]
+
*** [[manual-primary_network]]
** [[pantograph]]-[[esiliculosus]]
+
* [[IPPISOM-RXN]]
* [[Tiso_gene_15050]]
+
** 1 associated gene(s):
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_8653]]
== Pathways  ==
+
** 2 reconstruction source(s) associated:
* [[PWYQT-4427]], sulfoquinovosyl diacylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4427 PWYQT-4427]
+
*** [[manual-primary_network]]
** '''2''' reactions found over '''2''' reactions in the full pathway
+
*** [[annotation-in-silico_annotation]]
== Reconstruction information  ==
+
== Reaction(s) not found ==
* Category: [[orthology]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8429 RXN-8429]
** Source: [[orthology-esiliculosus]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8549 RXN-8549]
*** Tool: [[pantograph]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8550 RXN-8550]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2759}}
** [http://www.genome.jp/dbget-bin/www_bget?R06867 R06867]
+
{{#set: taxonomic range=TAX-1224}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=bisabolene biosynthesis (engineered)}}
{{#set: ec number=EC-2.4.1.M2}}
+
{{#set: reaction found=3}}
{{#set: gene associated=Tiso_gene_7966|Tiso_gene_17894|Tiso_gene_12341|Tiso_gene_11792|Tiso_gene_9428|Tiso_gene_10734|Tiso_gene_412|Tiso_gene_3385|Tiso_gene_19034|Tiso_gene_10863|Tiso_gene_15050}}
+
{{#set: total reaction=6}}
{{#set: in pathway=PWYQT-4427}}
+
{{#set: completion rate=50.0}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:10, 21 March 2018

Pathway PWY-7102

  • taxonomic range:
  • common name:
    • bisabolene biosynthesis (engineered)
  • Synonym(s):

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links