Difference between revisions of "RXN-15733"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15733 RXN-15733] == * direction: ** LEFT-TO-RIGHT * common name: ** folic_acid_synthesis_protei...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15733 RXN-15733] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* common name:
 
* common name:
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** bisabolene biosynthesis (engineered)
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** folic_acid_synthesis_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.6.3 EC-2.7.6.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[FPPSYN-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[CPD-16953]][c] '''=>''' 1 [[CPD-16954]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_16284]]
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** 1 ATP[c] '''+''' 1 2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin[c] '''=>''' 1 [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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== Genes associated with this reaction  ==
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*** [[orthology-synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_11659]]
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*** [[manual-primary_network]]
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** Source: [[annotation-in-silico_annotation]]
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* [[GPPSYN-RXN]]
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*** Assignment: EC-NUMBER
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** 9 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_19542]]
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== Pathways  ==
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*** [[Tiso_gene_18201]]
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* [[PWY-6148]], tetrahydromethanopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6148 PWY-6148]
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*** [[Tiso_gene_16284]]
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** '''2''' reactions found over '''14''' reactions in the full pathway
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*** [[Tiso_gene_2848]]
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== Reconstruction information  ==
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*** [[Tiso_gene_1035]]
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* Category: [[orthology]]
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*** [[Tiso_gene_4719]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_11582]]
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_13582]]
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* Category: [[annotation]]
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*** [[Tiso_gene_10317]]
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** Source: [[annotation-in-silico_annotation]]
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** 5 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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* [[IPPISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_8653]]
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** 2 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8429 RXN-8429]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8549 RXN-8549]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8550 RXN-8550]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: common name=folic_acid_synthesis_protein}}
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{{#set: common name=bisabolene biosynthesis (engineered)}}
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{{#set: ec number=EC-2.7.6.3}}
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{{#set: reaction found=3}}
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{{#set: gene associated=Tiso_gene_11659}}
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{{#set: total reaction=6}}
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{{#set: in pathway=PWY-6148}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:10, 21 March 2018

Reaction RXN-15733

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • folic_acid_synthesis_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin[c] => 1 [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate[c] + 1 AMP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6148, tetrahydromethanopterin biosynthesis: PWY-6148
    • 2 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15733&oldid=39940"