Difference between revisions of "PWY-7204"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD+-ADP-RIBOSYLTRANSFERASE-RXN NAD+-ADP-RIBOSYLTRANSFERASE-RXN] == * direction: ** REVERSIBLE * co...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD+-ADP-RIBOSYLTRANSFERASE-RXN NAD+-ADP-RIBOSYLTRANSFERASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** formin-d-like
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** pyridoxal 5'-phosphate salvage II (plants)
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** ORF
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** nod3_protein
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** tccd-inducible-parp-like_domain-containing_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.2.30 EC-2.4.2.30]
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* Synonym(s):
 
* Synonym(s):
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** vitamin B6 salvage (plants)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''9''' reactions in the full pathway
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** 1 [[ADP-D-Ribosyl-Acceptors]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NIACINAMIDE]][c] '''+''' 1 [[ADP-D-Ribosyl-Acceptors]][c] '''+''' 1 [[PROTON]][c]
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* [[3.1.3.74-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 an ADP-D-ribosyl acceptor[c] '''+''' 1 NAD+[c] '''<=>''' 1 nicotinamide[c] '''+''' 1 an ADP-D-ribosyl acceptor[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_18054]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PMPOXI-RXN]]
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* [[Tiso_gene_451]]
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** 1 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_1471]]
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***EC-NUMBER
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** 2 reconstruction source(s) associated:
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* [[Tiso_gene_450]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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* [[PNKIN-RXN]]
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* [[Tiso_gene_9412]]
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** 1 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_6106]]
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***EC-NUMBER
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** 4 reconstruction source(s) associated:
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* [[Tiso_gene_14353]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-athaliana]]
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***EC-NUMBER
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*** [[orthology-creinhardtii]]
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* [[Tiso_gene_12351]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[PNPOXI-RXN]]
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***EC-NUMBER
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** 1 associated gene(s):
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* [[Tiso_gene_17992]]
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*** [[Tiso_gene_1471]]
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** [[pantograph]]-[[esiliculosus]]
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** 2 reconstruction source(s) associated:
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* [[Tiso_gene_342]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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* [[PYRAMKIN-RXN]]
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* [[Tiso_gene_11399]]
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** 1 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_6106]]
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***EC-NUMBER
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** 4 reconstruction source(s) associated:
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* [[Tiso_gene_10079]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-athaliana]]
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***EC-NUMBER
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*** [[orthology-creinhardtii]]
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* [[Tiso_gene_4831]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[PYRIDOXINE-4-DEHYDROGENASE-RXN]]
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***EC-NUMBER
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** 1 associated gene(s):
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* [[Tiso_gene_16863]]
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*** [[Tiso_gene_18748]]
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** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_5199]]
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* [[PYRIDOXKIN-RXN]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_6106]]
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* [[Tiso_gene_12350]]
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** 4 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[orthology-athaliana]]
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* [[Tiso_gene_10080]]
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*** [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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* [[RXN-14181]]
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* [[Tiso_gene_18366]]
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** 1 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_18054]]
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_9411]]
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*** [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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== Reaction(s) not found ==
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14046 RXN-14046]
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* [[Tiso_gene_4453]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10122]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4452]]
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** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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* [[Tiso_gene_3487]]
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** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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* [[Tiso_gene_13134]]
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** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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* [[Tiso_gene_3971]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12360]]
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** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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* [[Tiso_gene_671]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_848]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2309]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16302]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9065]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04176 R04176]
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{{#set: common name=pyridoxal 5'-phosphate salvage II (plants)}}
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* UNIPROT:
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{{#set: common name=vitamin B6 salvage (plants)}}
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** [http://www.uniprot.org/uniprot/P09874 P09874]
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{{#set: reaction found=8}}
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** [http://www.uniprot.org/uniprot/P35875 P35875]
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/P26446 P26446]
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{{#set: completion rate=89.0}}
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** [http://www.uniprot.org/uniprot/P18493 P18493]
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** [http://www.uniprot.org/uniprot/Q08824 Q08824]
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** [http://www.uniprot.org/uniprot/P11103 P11103]
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** [http://www.uniprot.org/uniprot/P14299 P14299]
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** [http://www.uniprot.org/uniprot/P27008 P27008]
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** [http://www.uniprot.org/uniprot/P31669 P31669]
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** [http://www.uniprot.org/uniprot/Q11208 Q11208]
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** [http://www.uniprot.org/uniprot/Q11207 Q11207]
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** [http://www.uniprot.org/uniprot/O50017 O50017]
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** [http://www.uniprot.org/uniprot/O24570 O24570]
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** [http://www.uniprot.org/uniprot/Q9ZP54 Q9ZP54]
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** [http://www.uniprot.org/uniprot/P04977 P04977]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=formin-d-like}}
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{{#set: common name=ORF}}
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{{#set: common name=nod3_protein}}
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{{#set: common name=tccd-inducible-parp-like_domain-containing_protein}}
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−
{{#set: ec number=EC-2.4.2.30}}
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−
{{#set: gene associated=Tiso_gene_451|Tiso_gene_450|Tiso_gene_9412|Tiso_gene_14353|Tiso_gene_12351|Tiso_gene_17992|Tiso_gene_342|Tiso_gene_11399|Tiso_gene_10079|Tiso_gene_4831|Tiso_gene_16863|Tiso_gene_5199|Tiso_gene_12350|Tiso_gene_10080|Tiso_gene_18366|Tiso_gene_9411|Tiso_gene_4453|Tiso_gene_10122|Tiso_gene_4452|Tiso_gene_3487|Tiso_gene_13134|Tiso_gene_3971|Tiso_gene_12360|Tiso_gene_671|Tiso_gene_848|Tiso_gene_2309|Tiso_gene_16302|Tiso_gene_9065}}
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−
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=esiliculosus}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:11, 21 March 2018

Pathway PWY-7204

  • taxonomic range:
  • common name:
    • pyridoxal 5'-phosphate salvage II (plants)
  • Synonym(s):
    • vitamin B6 salvage (plants)

Reaction(s) found

8 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7204&oldid=39982"