Difference between revisions of "SHIKIMATE-5P"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.68-RXN 2.7.1.68-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-phosphatidylinosito...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5P SHIKIMATE-5P] == * smiles: ** C(=O)([O-])C1(=CC(OP(=O)([O-])[O-])C(O)C(O)C1) * com...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.68-RXN 2.7.1.68-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5P SHIKIMATE-5P] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(=O)([O-])C1(=CC(OP(=O)([O-])[O-])C(O)C(O)C1)
 
* common name:
 
* common name:
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** 1-phosphatidylinositol-4-phosphate_5-kinase
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** shikimate 3-phosphate
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** ORF
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* inchi key:
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** phosphatidylinositol-4-phosphate_5-kinase
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** InChIKey=QYOJSKGCWNAKGW-PBXRRBTRSA-K
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** phosphatidylinositol4phosphate5kinase
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* molecular weight:
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* ec number:
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** 251.109   
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** [http://enzyme.expasy.org/EC/2.7.1.68 EC-2.7.1.68]
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* Synonym(s):
 
* Synonym(s):
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** shikimate 5-phosphate
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** shikimate-5-P
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** 3-phosphoshikimate
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** shikimate-3-P
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-1108]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[2.5.1.19-RXN]]
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** 1 a 1-phosphatidyl-1D-myo-inositol 4-phosphate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate[c] '''+''' 1 H+[c]
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* [[SHIKIMATE-KINASE-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2021]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_17532]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_1131]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_15721]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14966]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2350]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_11381]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15722]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14055]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_17887]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_9590]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2008]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_730]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9249]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_18887]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7487]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14425 14425]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=14506806 14506806]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R03469 R03469]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=145989 145989]
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* UNIPROT:
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* BIGG : skm5p
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** [http://www.uniprot.org/uniprot/P48426 P48426]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q56YP2 Q56YP2]
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** [http://www.genome.jp/dbget-bin/www_bget?C03175 C03175]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: smiles=C(=O)([O-])C1(=CC(OP(=O)([O-])[O-])C(O)C(O)C1)}}
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{{#set: common name=1-phosphatidylinositol-4-phosphate_5-kinase}}
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{{#set: common name=shikimate 3-phosphate}}
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{{#set: common name=ORF}}
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{{#set: inchi key=InChIKey=QYOJSKGCWNAKGW-PBXRRBTRSA-K}}
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{{#set: common name=phosphatidylinositol-4-phosphate_5-kinase}}
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{{#set: molecular weight=251.109    }}
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{{#set: common name=phosphatidylinositol4phosphate5kinase}}
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{{#set: common name=shikimate 5-phosphate|shikimate-5-P|3-phosphoshikimate|shikimate-3-P}}
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{{#set: ec number=EC-2.7.1.68}}
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{{#set: reversible reaction associated=2.5.1.19-RXN|SHIKIMATE-KINASE-RXN}}
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{{#set: gene associated=Tiso_gene_2021|Tiso_gene_17532|Tiso_gene_1131|Tiso_gene_15721|Tiso_gene_14966|Tiso_gene_2350|Tiso_gene_11381|Tiso_gene_15722|Tiso_gene_14055|Tiso_gene_17887|Tiso_gene_9590|Tiso_gene_2008|Tiso_gene_730|Tiso_gene_9249|Tiso_gene_18887|Tiso_gene_7487}}
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{{#set: in pathway=PWY-6352|PWY-6351}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:11, 21 March 2018

Metabolite SHIKIMATE-5P

  • smiles:
    • C(=O)([O-])C1(=CC(OP(=O)([O-])[O-])C(O)C(O)C1)
  • common name:
    • shikimate 3-phosphate
  • inchi key:
    • InChIKey=QYOJSKGCWNAKGW-PBXRRBTRSA-K
  • molecular weight:
    • 251.109
  • Synonym(s):
    • shikimate 5-phosphate
    • shikimate-5-P
    • 3-phosphoshikimate
    • shikimate-3-P

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(=O)([O-])C1(=CC(OP(=O)([O-])[O-])C(O)C(O)C1)" cannot be used as a page name in this wiki.



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