Difference between revisions of "Tiso gene 3358"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-949 RXN0-949] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoyl_synthase_mitochondrial...")
(Created page with "Category:Gene == Gene Tiso_gene_3358 == * right end position: ** 14939 * transcription direction: ** NEGATIVE * left end position: ** 11372 * centisome position: ** 67.218...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-949 RXN0-949] ==
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== Gene Tiso_gene_3358 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 14939
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* common name:
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* transcription direction:
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** lipoyl_synthase_mitochondrial
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** NEGATIVE
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** lipoyl_mitochondrial
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* left end position:
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* ec number:
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** 11372
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** [http://enzyme.expasy.org/EC/2.8.1.8 EC-2.8.1.8]
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* centisome position:
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** 67.218346   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
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** 2 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Octanoylated-domains]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''=>''' 2 [[MET]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 2 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[CH33ADO]][c]
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* With common name(s):
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** 2 a sulfurated [sulfur carrier][c] '''+''' 2 S-adenosyl-L-methionine[c] '''+''' 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c] '''+''' 2 a reduced [2Fe-2S] ferredoxin[c] '''=>''' 2 L-methionine[c] '''+''' 2 an oxidized [2Fe-2S] ferredoxin[c] '''+''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c] '''+''' 2 an unsulfurated [sulfur carrier][c] '''+''' 2 5'-deoxyadenosine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_8049]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_437]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6987]], lipoate biosynthesis and incorporation III (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6987 PWY-6987]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY0-1275]], lipoate biosynthesis and incorporation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1275 PWY0-1275]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-501]], lipoate biosynthesis and incorporation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-501 PWY0-501]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-4041]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=14939}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07767 R07767]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=11372}}
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{{#set: common name=lipoyl_synthase_mitochondrial}}
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{{#set: centisome position=67.218346    }}
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{{#set: common name=lipoyl_mitochondrial}}
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{{#set: reaction associated=5-OXOPROLINASE-ATP-HYDROLYSING-RXN}}
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{{#set: ec number=EC-2.8.1.8}}
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{{#set: pathway associated=PWY-4041}}
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{{#set: gene associated=Tiso_gene_8049|Tiso_gene_437}}
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{{#set: in pathway=PWY-6987|PWY0-1275|PWY0-501}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:11, 21 March 2018

Gene Tiso_gene_3358

  • right end position:
    • 14939
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 11372
  • centisome position:
    • 67.218346
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3358&oldid=40023"