Difference between revisions of "RXN0-949"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_2717 == * left end position: ** 468 * transcription direction: ** POSITIVE * right end position: ** 3957 * centisome position: ** 2.526316...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-949 RXN0-949] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoyl_synthase_mitochondrial...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-949 RXN0-949] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** lipoyl_synthase_mitochondrial |
| − | * | + | ** lipoyl_mitochondrial |
| − | * | + | * ec number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/2.8.1.8 EC-2.8.1.8] |
| − | ** 2. | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * | + | ** 1 [[Octanoylated-domains]][c] '''+''' 2 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''=>''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 2 [[MET]][c] |
| − | ** | + | * With common name(s): |
| − | * [[ | + | ** 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c] '''+''' 2 a sulfurated [sulfur carrier][c] '''+''' 2 S-adenosyl-L-methionine[c] '''+''' 2 a reduced [2Fe-2S] ferredoxin[c] '''=>''' 2 an oxidized [2Fe-2S] ferredoxin[c] '''+''' 2 an unsulfurated [sulfur carrier][c] '''+''' 2 5'-deoxyadenosine[c] '''+''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c] '''+''' 2 L-methionine[c] |
| − | ** in-silico_annotation | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | ** in-silico_annotation | + | * Gene: [[Tiso_gene_8049]] |
| − | *** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | == Pathways | + | *** Assignment: EC-NUMBER |
| − | * [[PWY- | + | * Gene: [[Tiso_gene_437]] |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| + | == Pathways == | ||
| + | * [[PWY-6987]], lipoate biosynthesis and incorporation III (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6987 PWY-6987] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY0-1275]], lipoate biosynthesis and incorporation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1275 PWY0-1275] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY0-501]], lipoate biosynthesis and incorporation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-501 PWY0-501] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07767 R07767] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=lipoyl_synthase_mitochondrial}} |
| − | {{#set: | + | {{#set: common name=lipoyl_mitochondrial}} |
| − | {{#set: pathway | + | {{#set: ec number=EC-2.8.1.8}} |
| + | {{#set: gene associated=Tiso_gene_8049|Tiso_gene_437}} | ||
| + | {{#set: in pathway=PWY-6987|PWY0-1275|PWY0-501}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:11, 21 March 2018
Contents
Reaction RXN0-949
- direction:
- LEFT-TO-RIGHT
- common name:
- lipoyl_synthase_mitochondrial
- lipoyl_mitochondrial
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Octanoylated-domains[c] + 2 Sulfurated-Sulfur-Acceptors[c] + 2 S-ADENOSYLMETHIONINE[c] + 2 Reduced-2Fe-2S-Ferredoxins[c] => 2 Oxidized-2Fe-2S-Ferredoxins[c] + 2 Unsulfurated-Sulfur-Acceptors[c] + 2 CH33ADO[c] + 1 Lipoyl-Protein-N6-lipoyllysine[c] + 2 MET[c]
- With common name(s):
- 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c] + 2 a sulfurated [sulfur carrier][c] + 2 S-adenosyl-L-methionine[c] + 2 a reduced [2Fe-2S] ferredoxin[c] => 2 an oxidized [2Fe-2S] ferredoxin[c] + 2 an unsulfurated [sulfur carrier][c] + 2 5'-deoxyadenosine[c] + 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c] + 2 L-methionine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_8049
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_437
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-6987, lipoate biosynthesis and incorporation III (Bacillus): PWY-6987
- 2 reactions found over 3 reactions in the full pathway
- PWY0-1275, lipoate biosynthesis and incorporation II: PWY0-1275
- 2 reactions found over 2 reactions in the full pathway
- PWY0-501, lipoate biosynthesis and incorporation I: PWY0-501
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN:
