Difference between revisions of "Tiso gene 17497"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE--TRNA-LIGASE-RXN GLUTAMINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Gene == Gene Tiso_gene_17497 == * right end position: ** 2404 * transcription direction: ** NEGATIVE * left end position: ** 515 * centisome position: ** 14.06335...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE--TRNA-LIGASE-RXN GLUTAMINE--TRNA-LIGASE-RXN] ==
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== Gene Tiso_gene_17497 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2404
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* common name:
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* transcription direction:
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** glutamyl_or_glutaminyl_trna_synthetase
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** NEGATIVE
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** glutamine--trna_ligase
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* left end position:
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* ec number:
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** 515
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** [http://enzyme.expasy.org/EC/6.1.1.18 EC-6.1.1.18]
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* centisome position:
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** 14.063354   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.13.4-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[GLN-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLN-tRNAs]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 L-glutamine[c] '''+''' 1 a tRNAgln[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-glutaminyl-[tRNAgln][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_5915]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11124]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_7596]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2404}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20121 20121]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=515}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03652 R03652]
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{{#set: centisome position=14.063354    }}
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* UNIPROT:
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{{#set: reaction associated=3.1.13.4-RXN}}
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** [http://www.uniprot.org/uniprot/O59314 O59314]
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** [http://www.uniprot.org/uniprot/P43831 P43831]
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** [http://www.uniprot.org/uniprot/P47897 P47897]
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** [http://www.uniprot.org/uniprot/P14325 P14325]
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** [http://www.uniprot.org/uniprot/P95968 P95968]
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** [http://www.uniprot.org/uniprot/P13188 P13188]
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** [http://www.uniprot.org/uniprot/P00962 P00962]
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** [http://www.uniprot.org/uniprot/P52780 P52780]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutamyl_or_glutaminyl_trna_synthetase}}
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{{#set: common name=glutamine--trna_ligase}}
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{{#set: ec number=EC-6.1.1.18}}
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{{#set: gene associated=Tiso_gene_5915|Tiso_gene_11124|Tiso_gene_7596}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:12, 21 March 2018

Gene Tiso_gene_17497

  • right end position:
    • 2404
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 515
  • centisome position:
    • 14.063354
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17497&oldid=40118"