Difference between revisions of "RXN-5424"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME255 RME255] == * direction: ** LEFT-TO-RIGHT * common name: ** RME255 * Synonym(s): == Reaction...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5424 RXN-5424] == * direction: ** LEFT-TO-RIGHT * common name: ** indole-3-glycol dehydrogenase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME255 RME255] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5424 RXN-5424] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** RME255
+
** indole-3-glycol dehydrogenase
 +
** polyketide_synthase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 0.32 [[DCTP]][c] '''+''' 0.18 [[TTP]][c] '''+''' 2.372 [[WATER]][c] '''+''' 0.18 [[DATP]][c] '''+''' 0.32 [[DGTP]][c] '''+''' 1.372 [[ATP]][c] '''=>''' 1.372 [[Pi]][c] '''+''' 1.372 [[ADP]][c] '''+''' 1.0 [[PPI]][c] '''+''' 2.372 [[PROTON]][c] '''+''' 1.0 [[DNA-Holder]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[3-INDOLYLGLYCOLALDEHYDE]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[INDOLE-3-GLYCOL]][c] '''+''' 1 [[NAD]][c]
 
* With common name(s):
 
* With common name(s):
−
** 0.32 dCTP[c] '''+''' 0.18 dTTP[c] '''+''' 2.372 H2O[c] '''+''' 0.18 dATP[c] '''+''' 0.32 dGTP[c] '''+''' 1.372 ATP[c] '''=>''' 1.372 phosphate[c] '''+''' 1.372 ADP[c] '''+''' 1.0 diphosphate[c] '''+''' 2.372 H+[c] '''+''' 1.0 DNA[c]
+
** 1 H+[c] '''+''' 1 indole-3-glycol aldehyde[c] '''+''' 1 NADH[c] '''=>''' 1 indole-3-glycol[c] '''+''' 1 NAD+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_6562]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6563]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_7649]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5424]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5425]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-3162]], L-tryptophan degradation V (side chain pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3162 PWY-3162]
 +
** '''2''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[annotation]]
−
** [[primary_network]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=RME255}}
+
{{#set: common name=indole-3-glycol dehydrogenase}}
−
{{#set: in pathway=}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: reconstruction category=manual}}
+
{{#set: common name=ORF}}
−
{{#set: reconstruction source=primary_network}}
+
{{#set: ec number=EC-1.1.1.1}}
 +
{{#set: gene associated=Tiso_gene_6562|Tiso_gene_6563|Tiso_gene_7649|Tiso_gene_5424|Tiso_gene_5425}}
 +
{{#set: in pathway=PWY-3162}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:12, 21 March 2018

Reaction RXN-5424

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • indole-3-glycol dehydrogenase
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3162, L-tryptophan degradation V (side chain pathway): PWY-3162
    • 2 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-5424&oldid=40137"