Difference between revisions of "SUCCSEMIALDDEHYDROG-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-METHYL-BUTYRYL-COA 2-METHYL-BUTYRYL-COA] == * smiles: ** CCC(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-METHYL-BUTYRYL-COA 2-METHYL-BUTYRYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] ==
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* smiles:
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* direction:
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** CCC(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=LYNVNYDEQMMNMZ-XGXNYEOVSA-J
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** [http://enzyme.expasy.org/EC/1.2.1.79 EC-1.2.1.79]
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* common name:
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** 2-methylbutanoyl-CoA
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* molecular weight:
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** 847.62   
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* Synonym(s):
 
* Synonym(s):
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** S-2-methyl-butyryl-CoA
 
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** 2-methylbutyryl-CoA
 
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** α-methylbutyryl-CoA
 
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** α-methylbutanoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[MCDH_2mb2coa]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NADP]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SUC]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
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* [[DHRT_2mbcoa]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 NADP+[c] '''+''' 1 succinate semialdehyde[c] '''+''' 1 H2O[c] '''=>''' 1 succinate[c] '''+''' 2 H+[c] '''+''' 1 NADPH[c]
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* [[2KETO-3METHYLVALERATE-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6952]]
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6537]], 4-aminobutanoate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6537 PWY-6537]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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* [[P181-PWY]], nicotine degradation I (pyridine pathway): [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY]
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** '''2''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266569 45266569]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13213 13213]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57336 57336]
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** [http://www.genome.jp/dbget-bin/www_bget?R00714 R00714]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C01033 C01033]
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** [http://www.uniprot.org/uniprot/Q9JTN7 Q9JTN7]
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* HMDB : HMDB01041
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** [http://www.uniprot.org/uniprot/P25526 P25526]
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{{#set: smiles=CCC(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/O85997 O85997]
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{{#set: inchi key=InChIKey=LYNVNYDEQMMNMZ-XGXNYEOVSA-J}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-methylbutanoyl-CoA}}
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{{#set: ec number=EC-1.2.1.79}}
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{{#set: molecular weight=847.62    }}
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{{#set: gene associated=Tiso_gene_6952}}
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{{#set: common name=S-2-methyl-butyryl-CoA|2-methylbutyryl-CoA|α-methylbutyryl-CoA|α-methylbutanoyl-CoA}}
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{{#set: in pathway=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY|PWY-6537|PWY-6993|P105-PWY|P181-PWY}}
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{{#set: consumed by=MCDH_2mb2coa}}
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{{#set: reconstruction category=orthology}}
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{{#set: produced by=DHRT_2mbcoa}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: consumed or produced by=2KETO-3METHYLVALERATE-RXN}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:12, 21 March 2018

Reaction SUCCSEMIALDDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 succinate semialdehyde[c] + 1 H2O[c] => 1 succinate[c] + 2 H+[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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