Difference between revisions of "SUCCSEMIALDDEHYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-METHYL-BUTYRYL-COA 2-METHYL-BUTYRYL-COA] == * smiles: ** CCC(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-METHYL-BUTYRYL-COA 2-METHYL-BUTYRYL-COA] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] ==
−
* smiles:
+
* direction:
−
** CCC(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
+
** LEFT-TO-RIGHT
−
* inchi key:
+
* ec number:
−
** InChIKey=LYNVNYDEQMMNMZ-XGXNYEOVSA-J
+
** [http://enzyme.expasy.org/EC/1.2.1.79 EC-1.2.1.79]
−
* common name:
+
−
** 2-methylbutanoyl-CoA
+
−
* molecular weight:
+
−
** 847.62   
+
 
* Synonym(s):
 
* Synonym(s):
−
** S-2-methyl-butyryl-CoA
 
−
** 2-methylbutyryl-CoA
 
−
** α-methylbutyryl-CoA
 
−
** α-methylbutanoyl-CoA
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[MCDH_2mb2coa]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[NADP]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SUC]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
−
* [[DHRT_2mbcoa]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 NADP+[c] '''+''' 1 succinate semialdehyde[c] '''+''' 1 H2O[c] '''=>''' 1 succinate[c] '''+''' 2 H+[c] '''+''' 1 NADPH[c]
−
* [[2KETO-3METHYLVALERATE-RXN]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_6952]]
 +
** Source: [[orthology-synechocystis]]
 +
== Pathways  ==
 +
* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6537]], 4-aminobutanoate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6537 PWY-6537]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[P181-PWY]], nicotine degradation I (pyridine pathway): [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY]
 +
** '''2''' reactions found over '''17''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266569 45266569]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13213 13213]
−
* CHEBI:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57336 57336]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00714 R00714]
−
* LIGAND-CPD:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?C01033 C01033]
+
** [http://www.uniprot.org/uniprot/Q9JTN7 Q9JTN7]
−
* HMDB : HMDB01041
+
** [http://www.uniprot.org/uniprot/P25526 P25526]
−
{{#set: smiles=CCC(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
+
** [http://www.uniprot.org/uniprot/O85997 O85997]
−
{{#set: inchi key=InChIKey=LYNVNYDEQMMNMZ-XGXNYEOVSA-J}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2-methylbutanoyl-CoA}}
+
{{#set: ec number=EC-1.2.1.79}}
−
{{#set: molecular weight=847.62    }}
+
{{#set: gene associated=Tiso_gene_6952}}
−
{{#set: common name=S-2-methyl-butyryl-CoA|2-methylbutyryl-CoA|α-methylbutyryl-CoA|α-methylbutanoyl-CoA}}
+
{{#set: in pathway=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY|PWY-6537|PWY-6993|P105-PWY|P181-PWY}}
−
{{#set: consumed by=MCDH_2mb2coa}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: produced by=DHRT_2mbcoa}}
+
{{#set: reconstruction source=orthology-synechocystis}}
−
{{#set: consumed or produced by=2KETO-3METHYLVALERATE-RXN}}
+
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:12, 21 March 2018

Reaction SUCCSEMIALDDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 succinate semialdehyde[c] + 1 H2O[c] => 1 succinate[c] + 2 H+[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SUCCSEMIALDDEHYDROG-RXN&oldid=40160"