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| [[Category:Reaction]] | | [[Category:Reaction]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-TYROSINE-PHOSPHATASE-RXN PROTEIN-TYROSINE-PHOSPHATASE-RXN] == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17927 RXN-17927] == |
| * direction: | | * direction: |
| ** LEFT-TO-RIGHT | | ** LEFT-TO-RIGHT |
| * common name: | | * common name: |
− | ** ORF | + | ** gtp-binding_protein |
− | ** map_kinase_phosphatase_1
| + | |
− | ** dual_specificity_protein_phosphatase_cdc14a
| + | |
− | ** tyrosine_phosphatase_family_protein
| + | |
− | ** dual_specificity_phosphatase
| + | |
− | ** receptor-type_tyrosine-protein_phosphatase_delta-_partial
| + | |
− | ** probable_tyrosine-protein_phosphatase_dg1060
| + | |
− | * ec number:
| + | |
− | ** [http://enzyme.expasy.org/EC/3.1.3.48 EC-3.1.3.48]
| + | |
| * Synonym(s): | | * Synonym(s): |
| | | |
| == Reaction Formula == | | == Reaction Formula == |
| * With identifiers: | | * With identifiers: |
− | ** 1 [[Protein-tyrosine-phosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Protein-Tyrosines]][c] '''+''' 1 [[Pi]][c] | + | ** 1 [[3Prime-OH-Terminated-RNAs]][c] '''+''' 1 [[A-5-prime-PP-5-prime-RNA]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[RNAs]][c] '''+''' 1 [[PROTON]][c] |
| * With common name(s): | | * With common name(s): |
− | ** 1 a [protein]-L-tyrosine phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 a [protein]-L-tyrosine[c] '''+''' 1 phosphate[c] | + | ** 1 an [RNA]-3'-hydroxyl[c] '''+''' 1 a 5'-(5'-diphosphoadenosine)-(ribonucleoside)-[RNA][c] '''=>''' 1 AMP[c] '''+''' 1 a ribonucleic acid[c] '''+''' 1 H+[c] |
| | | |
| == Genes associated with this reaction == | | == Genes associated with this reaction == |
| Genes have been associated with this reaction based on different elements listed below. | | Genes have been associated with this reaction based on different elements listed below. |
− | * [[Tiso_gene_17987]] | + | * Gene: [[Tiso_gene_8396]] |
− | ** IN-SILICO_ANNOTATION | + | ** Source: [[annotation-in-silico_annotation]] |
− | ***EC-NUMBER
| + | *** Assignment: EC-NUMBER |
− | * [[Tiso_gene_3461]]
| + | * Gene: [[Tiso_gene_8397]] |
− | ** IN-SILICO_ANNOTATION
| + | ** Source: [[annotation-in-silico_annotation]] |
− | ***EC-NUMBER
| + | *** Assignment: EC-NUMBER |
− | * [[Tiso_gene_19716]]
| + | * Gene: [[Tiso_gene_8398]] |
− | ** IN-SILICO_ANNOTATION
| + | ** Source: [[annotation-in-silico_annotation]] |
− | ***EC-NUMBER | + | *** Assignment: EC-NUMBER |
− | * [[Tiso_gene_8252]] | + | |
− | ** IN-SILICO_ANNOTATION | + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | * [[Tiso_gene_20064]]
| + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***AUTOMATED-NAME-MATCH
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | * [[Tiso_gene_12920]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER | + | |
− | ** [[pantograph]]-[[esiliculosus]] | + | |
− | * [[Tiso_gene_807]] | + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_13113]] | + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_3693]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER | + | |
− | * [[Tiso_gene_15176]]
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | * [[Tiso_gene_13635]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_2578]]
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | * [[Tiso_gene_3751]]
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | * [[Tiso_gene_19083]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_16782]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_4164]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***AUTOMATED-NAME-MATCH
| + | |
− | * [[Tiso_gene_12712]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
| == Pathways == | | == Pathways == |
| == Reconstruction information == | | == Reconstruction information == |
− | * Category: [[orthology]]
| |
− | ** Source: [[orthology-esiliculosus]]
| |
− | *** Tool: [[pantograph]]
| |
| * Category: [[annotation]] | | * Category: [[annotation]] |
− | ** Source: [[annotation-experimental_annotation]]
| |
− | *** Tool: [[pathwaytools]]
| |
| ** Source: [[annotation-in-silico_annotation]] | | ** Source: [[annotation-in-silico_annotation]] |
| *** Tool: [[pathwaytools]] | | *** Tool: [[pathwaytools]] |
| == External links == | | == External links == |
− | * LIGAND-RXN:
| |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R02585 R02585]
| |
− | * UNIPROT:
| |
− | ** [http://www.uniprot.org/uniprot/P06800 P06800]
| |
− | ** [http://www.uniprot.org/uniprot/P20483 P20483]
| |
− | ** [http://www.uniprot.org/uniprot/P23748 P23748]
| |
− | ** [http://www.uniprot.org/uniprot/P20417 P20417]
| |
− | ** [http://www.uniprot.org/uniprot/P18433 P18433]
| |
− | ** [http://www.uniprot.org/uniprot/P24666 P24666]
| |
− | ** [http://www.uniprot.org/uniprot/Q06180 Q06180]
| |
− | ** [http://www.uniprot.org/uniprot/P30307 P30307]
| |
− | ** [http://www.uniprot.org/uniprot/P25044 P25044]
| |
− | ** [http://www.uniprot.org/uniprot/P27574 P27574]
| |
− | ** [http://www.uniprot.org/uniprot/P29074 P29074]
| |
− | ** [http://www.uniprot.org/uniprot/P26045 P26045]
| |
− | ** [http://www.uniprot.org/uniprot/P35234 P35234]
| |
− | ** [http://www.uniprot.org/uniprot/P35832 P35832]
| |
− | ** [http://www.uniprot.org/uniprot/P30304 P30304]
| |
− | ** [http://www.uniprot.org/uniprot/Q03019 Q03019]
| |
− | ** [http://www.uniprot.org/uniprot/P11064 P11064]
| |
− | ** [http://www.uniprot.org/uniprot/P30306 P30306]
| |
− | ** [http://www.uniprot.org/uniprot/P30309 P30309]
| |
− | ** [http://www.uniprot.org/uniprot/P43378 P43378]
| |
− | ** [http://www.uniprot.org/uniprot/P29349 P29349]
| |
− | ** [http://www.uniprot.org/uniprot/P29351 P29351]
| |
− | ** [http://www.uniprot.org/uniprot/Q9W0G1 Q9W0G1]
| |
− | ** [http://www.uniprot.org/uniprot/P23471 P23471]
| |
− | ** [http://www.uniprot.org/uniprot/P35235 P35235]
| |
− | ** [http://www.uniprot.org/uniprot/P08575 P08575]
| |
− | ** [http://www.uniprot.org/uniprot/P18052 P18052]
| |
− | ** [http://www.uniprot.org/uniprot/P35822 P35822]
| |
− | ** [http://www.uniprot.org/uniprot/P23470 P23470]
| |
− | ** [http://www.uniprot.org/uniprot/P34138 P34138]
| |
− | ** [http://www.uniprot.org/uniprot/Q24495 Q24495]
| |
− | ** [http://www.uniprot.org/uniprot/Q9W4F5 Q9W4F5]
| |
− | ** [http://www.uniprot.org/uniprot/Q15426 Q15426]
| |
− | ** [http://www.uniprot.org/uniprot/P41499 P41499]
| |
− | ** [http://www.uniprot.org/uniprot/Q28613 Q28613]
| |
− | ** [http://www.uniprot.org/uniprot/Q28182 Q28182]
| |
− | ** [http://www.uniprot.org/uniprot/P15273 P15273]
| |
− | ** [http://www.uniprot.org/uniprot/Q91870 Q91870]
| |
− | ** [http://www.uniprot.org/uniprot/Q91976 Q91976]
| |
− | ** [http://www.uniprot.org/uniprot/Q12923 Q12923]
| |
− | ** [http://www.uniprot.org/uniprot/P41893 P41893]
| |
− | ** [http://www.uniprot.org/uniprot/Q62132 Q62132]
| |
− | ** [http://www.uniprot.org/uniprot/Q92124 Q92124]
| |
− | ** [http://www.uniprot.org/uniprot/P23468 P23468]
| |
− | ** [http://www.uniprot.org/uniprot/Q62917 Q62917]
| |
− | ** [http://www.uniprot.org/uniprot/Q64696 Q64696]
| |
− | ** [http://www.uniprot.org/uniprot/P40347 P40347]
| |
− | ** [http://www.uniprot.org/uniprot/P16620 P16620]
| |
− | ** [http://www.uniprot.org/uniprot/P30305 P30305]
| |
− | ** [http://www.uniprot.org/uniprot/P29352 P29352]
| |
− | ** [http://www.uniprot.org/uniprot/Q05909 Q05909]
| |
− | ** [http://www.uniprot.org/uniprot/Q91871 Q91871]
| |
− | ** [http://www.uniprot.org/uniprot/P49446 P49446]
| |
− | ** [http://www.uniprot.org/uniprot/Q9CDL7 Q9CDL7]
| |
− | ** [http://www.uniprot.org/uniprot/P30311 P30311]
| |
− | ** [http://www.uniprot.org/uniprot/Q64487 Q64487]
| |
− | ** [http://www.uniprot.org/uniprot/Q9JU65 Q9JU65]
| |
− | ** [http://www.uniprot.org/uniprot/P35992 P35992]
| |
− | ** [http://www.uniprot.org/uniprot/P0AAB2 P0AAB2]
| |
− | ** [http://www.uniprot.org/uniprot/Q9PN39 Q9PN39]
| |
− | ** [http://www.uniprot.org/uniprot/Q16825 Q16825]
| |
− | ** [http://www.uniprot.org/uniprot/Q12913 Q12913]
| |
− | ** [http://www.uniprot.org/uniprot/P48967 P48967]
| |
− | ** [http://www.uniprot.org/uniprot/Q60998 Q60998]
| |
− | ** [http://www.uniprot.org/uniprot/Q90815 Q90815]
| |
− | ** [http://www.uniprot.org/uniprot/Q90816 Q90816]
| |
− | ** [http://www.uniprot.org/uniprot/Q90817 Q90817]
| |
− | ** [http://www.uniprot.org/uniprot/P30310 P30310]
| |
− | ** [http://www.uniprot.org/uniprot/Q62604 Q62604]
| |
− | ** [http://www.uniprot.org/uniprot/Q64605 Q64605]
| |
− | ** [http://www.uniprot.org/uniprot/Q05209 Q05209]
| |
− | ** [http://www.uniprot.org/uniprot/Q60673 Q60673]
| |
− | ** [http://www.uniprot.org/uniprot/Q62130 Q62130]
| |
− | ** [http://www.uniprot.org/uniprot/Q15678 Q15678]
| |
− | ** [http://www.uniprot.org/uniprot/Q92932 Q92932]
| |
− | ** [http://www.uniprot.org/uniprot/Q90687 Q90687]
| |
− | ** [http://www.uniprot.org/uniprot/P79923 P79923]
| |
− | ** [http://www.uniprot.org/uniprot/O00197 O00197]
| |
− | ** [http://www.uniprot.org/uniprot/Q61042 Q61042]
| |
− | ** [http://www.uniprot.org/uniprot/Q9ERM5 Q9ERM5]
| |
− | ** [http://www.uniprot.org/uniprot/P35236 P35236]
| |
− | ** [http://www.uniprot.org/uniprot/P35821 P35821]
| |
− | ** [http://www.uniprot.org/uniprot/Q06124 Q06124]
| |
− | ** [http://www.uniprot.org/uniprot/O13016 O13016]
| |
− | ** [http://www.uniprot.org/uniprot/P23467 P23467]
| |
− | ** [http://www.uniprot.org/uniprot/P23469 P23469]
| |
− | ** [http://www.uniprot.org/uniprot/P35233 P35233]
| |
− | ** [http://www.uniprot.org/uniprot/P30634 P30634]
| |
− | ** [http://www.uniprot.org/uniprot/P28827 P28827]
| |
− | ** [http://www.uniprot.org/uniprot/P28828 P28828]
| |
− | ** [http://www.uniprot.org/uniprot/Q64497 Q64497]
| |
− | ** [http://www.uniprot.org/uniprot/P29350 P29350]
| |
− | ** [http://www.uniprot.org/uniprot/P30303 P30303]
| |
− | ** [http://www.uniprot.org/uniprot/P32586 P32586]
| |
− | ** [http://www.uniprot.org/uniprot/P32587 P32587]
| |
− | ** [http://www.uniprot.org/uniprot/Q02256 Q02256]
| |
− | ** [http://www.uniprot.org/uniprot/Q8VBV0 Q8VBV0]
| |
− | ** [http://www.uniprot.org/uniprot/Q8R169 Q8R169]
| |
− | ** [http://www.uniprot.org/uniprot/Q64512 Q64512]
| |
− | ** [http://www.uniprot.org/uniprot/Q29029 Q29029]
| |
− | ** [http://www.uniprot.org/uniprot/P38148 P38148]
| |
− | ** [http://www.uniprot.org/uniprot/Q64604 Q64604]
| |
− | ** [http://www.uniprot.org/uniprot/Q63745 Q63745]
| |
− | ** [http://www.uniprot.org/uniprot/P39155 P39155]
| |
− | ** [http://www.uniprot.org/uniprot/Q64494 Q64494]
| |
− | ** [http://www.uniprot.org/uniprot/Q62728 Q62728]
| |
− | ** [http://www.uniprot.org/uniprot/Q64502 Q64502]
| |
− | ** [http://www.uniprot.org/uniprot/Q64504 Q64504]
| |
− | ** [http://www.uniprot.org/uniprot/Q46630 Q46630]
| |
− | ** [http://www.uniprot.org/uniprot/Q17024 Q17024]
| |
− | ** [http://www.uniprot.org/uniprot/P35831 P35831]
| |
− | ** [http://www.uniprot.org/uniprot/Q00684 Q00684]
| |
− | ** [http://www.uniprot.org/uniprot/Q16827 Q16827]
| |
− | ** [http://www.uniprot.org/uniprot/P06652 P06652]
| |
− | ** [http://www.uniprot.org/uniprot/P29461 P29461]
| |
− | ** [http://www.uniprot.org/uniprot/Q29500 Q29500]
| |
− | ** [http://www.uniprot.org/uniprot/Q62370 Q62370]
| |
− | ** [http://www.uniprot.org/uniprot/Q92735 Q92735]
| |
− | ** [http://www.uniprot.org/uniprot/Q45408 Q45408]
| |
− | ** [http://www.uniprot.org/uniprot/O82710 O82710]
| |
− | ** [http://www.uniprot.org/uniprot/O88488 O88488]
| |
− | ** [http://www.uniprot.org/uniprot/O88902 O88902]
| |
− | ** [http://www.uniprot.org/uniprot/O94044 O94044]
| |
− | ** [http://www.uniprot.org/uniprot/O44329 O44329]
| |
− | ** [http://www.uniprot.org/uniprot/O76282 O76282]
| |
− | ** [http://www.uniprot.org/uniprot/Q98936 Q98936]
| |
− | ** [http://www.uniprot.org/uniprot/Q91054 Q91054]
| |
− | ** [http://www.uniprot.org/uniprot/Q22582 Q22582]
| |
− | ** [http://www.uniprot.org/uniprot/Q39491 Q39491]
| |
− | ** [http://www.uniprot.org/uniprot/O65190 O65190]
| |
− | ** [http://www.uniprot.org/uniprot/P16621 P16621]
| |
− | ** [http://www.uniprot.org/uniprot/P10586 P10586]
| |
− | ** [http://www.uniprot.org/uniprot/Q64224 Q64224]
| |
− | ** [http://www.uniprot.org/uniprot/P18031 P18031]
| |
| {{#set: direction=LEFT-TO-RIGHT}} | | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: common name=ORF}} | + | {{#set: common name=gtp-binding_protein}} |
− | {{#set: common name=map_kinase_phosphatase_1}}
| + | {{#set: gene associated=Tiso_gene_8396|Tiso_gene_8397|Tiso_gene_8398}} |
− | {{#set: common name=dual_specificity_protein_phosphatase_cdc14a}}
| + | |
− | {{#set: common name=tyrosine_phosphatase_family_protein}}
| + | |
− | {{#set: common name=dual_specificity_phosphatase}}
| + | |
− | {{#set: common name=receptor-type_tyrosine-protein_phosphatase_delta-_partial}}
| + | |
− | {{#set: common name=probable_tyrosine-protein_phosphatase_dg1060}}
| + | |
− | {{#set: ec number=EC-3.1.3.48}}
| + | |
− | {{#set: gene associated=Tiso_gene_17987|Tiso_gene_3461|Tiso_gene_19716|Tiso_gene_8252|Tiso_gene_20064|Tiso_gene_12920|Tiso_gene_807|Tiso_gene_13113|Tiso_gene_3693|Tiso_gene_15176|Tiso_gene_13635|Tiso_gene_2578|Tiso_gene_3751|Tiso_gene_19083|Tiso_gene_16782|Tiso_gene_4164|Tiso_gene_12712}} | + | |
| {{#set: in pathway=}} | | {{#set: in pathway=}} |
− | {{#set: reconstruction category=orthology|annotation}} | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | + | {{#set: reconstruction source=annotation-in-silico_annotation}} |
− | {{#set: reconstruction tool=pantograph|pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools}} |
Genes have been associated with this reaction based on different elements listed below.