Difference between revisions of "Tiso gene 18217"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11477 RXN-11477] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier...")
(Created page with "Category:Gene == Gene Tiso_gene_18217 == * right end position: ** 3104 * transcription direction: ** NEGATIVE * left end position: ** 259 * centisome position: ** 8.175505...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11477 RXN-11477] ==
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== Gene Tiso_gene_18217 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3104
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* common name:
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* transcription direction:
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** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 259
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* centisome position:
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** 8.175505   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RIB5PISOM-RXN]]
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** 1 [[3-Hydroxyglutaryl-ACP-methyl-ester]][c] '''=>''' 1 [[Enoylglutaryl-ACP-methyl-esters]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a (3R)-3-hydroxyglutaryl-[acp] methyl ester[c] '''=>''' 1 an enoylglutaryl-[acp] methyl ester[c] '''+''' 1 H2O[c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-athaliana]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6885]]
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== Pathways associated ==
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** Source: [[orthology-creinhardtii]]
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* [[P124-PWY]]
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* Gene: [[Tiso_gene_6884]]
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* [[CALVIN-PWY]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-5723]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-1861]]
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== Pathways ==
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* [[P185-PWY]]
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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* [[NONOXIPENT-PWY]]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3104}}
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{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: left end position=259}}
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{{#set: gene associated=Tiso_gene_6885|Tiso_gene_6884}}
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{{#set: centisome position=8.175505    }}
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{{#set: in pathway=PWY-6519}}
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{{#set: reaction associated=RIB5PISOM-RXN}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=P124-PWY|CALVIN-PWY|PWY-5723|PWY-1861|P185-PWY|NONOXIPENT-PWY}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:13, 21 March 2018

Gene Tiso_gene_18217

  • right end position:
    • 3104
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 259
  • centisome position:
    • 8.175505
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18217&oldid=40290"