Difference between revisions of "RXN-11477"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** uropor...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11477 RXN-11477] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11477 RXN-11477] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
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** uroporphyrinogen_synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.75 EC-4.2.1.75]
+
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c]
+
** 1 [[3-Hydroxyglutaryl-ACP-methyl-ester]][c] '''=>''' 1 [[Enoylglutaryl-ACP-methyl-esters]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 preuroporphyrinogen[c] '''=>''' 1 H2O[c] '''+''' 1 uroporphyrinogen-III[c]
+
** 1 a (3R)-3-hydroxyglutaryl-[acp] methyl ester[c] '''=>''' 1 an enoylglutaryl-[acp] methyl ester[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18827]]
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* Gene: [[Tiso_gene_6885]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
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* Gene: [[Tiso_gene_6884]]
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* [[Tiso_gene_11630]]
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** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
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*** Assignment: AUTOMATED-NAME-MATCH
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
* Category: [[annotation]]
−
* [[manual]]:
+
** Source: [[annotation-experimental_annotation]]
−
** [[primary_network]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P10746 P10746]
 
−
** [http://www.uniprot.org/uniprot/P51163 P51163]
 
−
** [http://www.uniprot.org/uniprot/P21248 P21248]
 
−
** [http://www.uniprot.org/uniprot/Q58401 Q58401]
 
−
** [http://www.uniprot.org/uniprot/P09126 P09126]
 
−
** [http://www.uniprot.org/uniprot/Q59294 Q59294]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
−
{{#set: common name=uroporphyrinogen_synthase}}
+
{{#set: ec number=EC-4.2.1.59}}
−
{{#set: ec number=EC-4.2.1.75}}
+
{{#set: gene associated=Tiso_gene_6885|Tiso_gene_6884}}
−
{{#set: gene associated=Tiso_gene_18827|Tiso_gene_11630}}
+
{{#set: in pathway=PWY-6519}}
−
{{#set: in pathway=PWY-5189|PWY-5188}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-creinhardtii}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:13, 21 March 2018

Reaction RXN-11477

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I: PWY-6519
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

"3-hydroxyacyl-[acyl-carrier-protein] dehydratase" cannot be used as a page name in this wiki.




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