Difference between revisions of "TRNAs-containing-epoxy-quenosine"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNAs-containing-epoxy-quenosine tRNAs-containing-epoxy-quenosine] == * common name: ** an epox...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNAs-containing-epoxy-quenosine tRNAs-containing-epoxy-quenosine] ==
−
* direction:
+
* common name:
−
** LEFT-TO-RIGHT
+
** an epoxyqueuosine34 in tRNA
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.4.1.223 EC-2.4.1.223]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** an epoxyqueuosine at position 34 of a tRNA containing GUN anticodon
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[GlcA-Gal-Gal-Xyl-Proteins]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP]][c]
+
* [[RXN0-1342]]
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 H+[c] '''+''' 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_10445]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8143]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4321]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
+
−
** '''3''' reactions found over '''13''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: common name=an epoxyqueuosine34 in tRNA}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07397 R07397]
+
{{#set: common name=an epoxyqueuosine at position 34 of a tRNA containing GUN anticodon}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: produced by=RXN0-1342}}
−
{{#set: ec number=EC-2.4.1.223}}
+
−
{{#set: gene associated=Tiso_gene_10445|Tiso_gene_8143|Tiso_gene_4321}}
+
−
{{#set: in pathway=PWY-6558}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:14, 21 March 2018

Metabolite tRNAs-containing-epoxy-quenosine

  • common name:
    • an epoxyqueuosine34 in tRNA
  • Synonym(s):
    • an epoxyqueuosine at position 34 of a tRNA containing GUN anticodon

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRNAs-containing-epoxy-quenosine&oldid=40339"