Difference between revisions of "RXN-6883"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_2452 == * left end position: ** 9912 * transcription direction: ** POSITIVE * right end position: ** 10341 * centisome position: ** 51.0796...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6883 RXN-6883] == * direction: ** LEFT-TO-RIGHT * common name: ** alternative_oxidase * ec numb...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6883 RXN-6883] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** alternative_oxidase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.10.3.11 EC-1.10.3.11] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** | + | ** 2 [[Ubiquinols]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[Ubiquinones]][c] |
| − | *** | + | * With common name(s): |
| − | * [[ | + | ** 2 an ubiquinol[c] '''+''' 1 oxygen[c] '''=>''' 2 H2O[c] '''+''' 2 a ubiquinone[c] |
| − | ** in-silico_annotation | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | ** in-silico_annotation | + | * Gene: [[Tiso_gene_7486]] |
| − | *** | + | ** Source: [[orthology-esiliculosus]] |
| − | * [[ | + | * Gene: [[Tiso_gene_17130]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ** | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | ** | + | * Gene: [[Tiso_gene_7953]] |
| − | *** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | == | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | * [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | * [[ | + | * Gene: [[Tiso_gene_8278]] |
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[PWY-4302]], aerobic respiration III (alternative oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | + | * RHEA: | |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30258 30258] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R09504 R09504] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: pathway | + | {{#set: common name=alternative_oxidase}} |
| + | {{#set: ec number=EC-1.10.3.11}} | ||
| + | {{#set: gene associated=Tiso_gene_7486|Tiso_gene_17130|Tiso_gene_7953|Tiso_gene_8278}} | ||
| + | {{#set: in pathway=PWY-4302}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 20:14, 21 March 2018
Contents
Reaction RXN-6883
- direction:
- LEFT-TO-RIGHT
- common name:
- alternative_oxidase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 Ubiquinols[c] + 1 OXYGEN-MOLECULE[c] => 2 WATER[c] + 2 Ubiquinones[c]
- With common name(s):
- 2 an ubiquinol[c] + 1 oxygen[c] => 2 H2O[c] + 2 a ubiquinone[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_7486
- Source: orthology-esiliculosus
- Gene: Tiso_gene_17130
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_7953
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_8278
- Source: orthology-esiliculosus
Pathways
- PWY-4302, aerobic respiration III (alternative oxidase pathway): PWY-4302
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
