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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9623 RXN-9623] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-3-HYDROXYACYL-COA L-3-HYDROXYACYL-COA] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** polyketide_synthase | + | ** a (3S)-3-hydroxyacyl-CoA |
| − | ** ORF
| + | |
| − | ** long_chain_acyl-_synthetase
| + | |
| − | ** acyl-_synthetase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** (3S)-3-hydroxyacyl-CoA |
| | + | ** 3-hydroxyacyl-CoA |
| | + | ** 3-OH-acyl-CoA |
| | + | ** RCHOHCH2CO-CoA |
| | + | ** trans-3-hydroxyacyl-CoA |
| | + | ** (S)-3-hydroxyacyl-CoA |
| | + | ** a (S)-3-hydroxyacyl-CoA |
| | + | ** a trans-3-hydroxyacyl-CoA |
| | + | ** a 3-OH-acyl-CoA |
| | + | ** a 3-hydroxyacyl-CoA |
| | + | ** an L-3-hydroxyacyl-CoA |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[OHACYL-COA-DEHYDROG-RXN]] |
| − | ** 1 [[ATP]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PALMITYL-COA]][c] '''+''' 1 [[AMP]][c]
| + | == Reaction(s) known to produce the compound == |
| − | * With common name(s):
| + | * [[ENOYL-COA-HYDRAT-RXN]] |
| − | ** 1 ATP[c] '''+''' 1 palmitate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 diphosphate[c] '''+''' 1 palmitoyl-CoA[c] '''+''' 1 AMP[c]
| + | == Reaction(s) of unknown directionality == |
| − | | + | * [[RXN-16133]] |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * Gene: [[Tiso_gene_9394]] | + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | * Gene: [[Tiso_gene_13394]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_12275]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | * Gene: [[Tiso_gene_10876]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_7855]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_348]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | * Gene: [[Tiso_gene_136]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_135]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_500]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_4191]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972] | + | |
| − | ** '''4''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | * [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
| + | |
| − | ** '''31''' reactions found over '''31''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]] | + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a (3S)-3-hydroxyacyl-CoA}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30754 30754]
| + | {{#set: common name=(3S)-3-hydroxyacyl-CoA|3-hydroxyacyl-CoA|3-OH-acyl-CoA|RCHOHCH2CO-CoA|trans-3-hydroxyacyl-CoA|(S)-3-hydroxyacyl-CoA|a (S)-3-hydroxyacyl-CoA|a trans-3-hydroxyacyl-CoA|a 3-OH-acyl-CoA|a 3-hydroxyacyl-CoA|an L-3-hydroxyacyl-CoA}} |
| − | * LIGAND-RXN:
| + | {{#set: consumed by=OHACYL-COA-DEHYDROG-RXN}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01280 R01280]
| + | {{#set: produced by=ENOYL-COA-HYDRAT-RXN}} |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: reversible reaction associated=RXN-16133}} |
| − | {{#set: common name=polyketide_synthase}}
| + | |
| − | {{#set: common name=ORF}}
| + | |
| − | {{#set: common name=long_chain_acyl-_synthetase}}
| + | |
| − | {{#set: common name=acyl-_synthetase}} | + | |
| − | {{#set: ec number=EC-6.2.1.3}}
| + | |
| − | {{#set: gene associated=Tiso_gene_9394|Tiso_gene_13394|Tiso_gene_12275|Tiso_gene_10876|Tiso_gene_7855|Tiso_gene_348|Tiso_gene_136|Tiso_gene_135|Tiso_gene_500|Tiso_gene_4191}}
| + | |
| − | {{#set: in pathway=PWY-5972|PWY-5971}} | + | |
| − | {{#set: reconstruction category=orthology|annotation}} | + | |
| − | {{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-creinhardtii|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}} | + | |
