Difference between revisions of "Tiso gene 12892"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATE-SYNTHASE-RXN SUCROSE-PHOSPHATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
 
(Created page with "Category:Gene == Gene Tiso_gene_12892 == * right end position: ** 4800 * transcription direction: ** POSITIVE * left end position: ** 3018 * centisome position: ** 45.3629...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATE-SYNTHASE-RXN SUCROSE-PHOSPHATE-SYNTHASE-RXN] ==
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== Gene Tiso_gene_12892 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4800
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* common name:
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* transcription direction:
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** sucrose-phosphate_synthase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.4.1.14 EC-2.4.1.14]
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** 3018
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* centisome position:
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** 45.362995   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.6-RXN]]
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** 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[SUCROSE-6P]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 β-D-fructofuranose 6-phosphate[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 UDP[c] '''+''' 1 sucrose 6F-phosphate[c] '''+''' 1 H+[c]
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* Reaction: [[3.2.1.73-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[QUINOPRIBOTRANS-RXN]]
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* [[Tiso_gene_14247]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-5316]]
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* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
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* [[PWY-5653]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[PYRIDNUCSYN-PWY]]
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* [[PWY-7347]], sucrose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7347 PWY-7347]
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* [[PWY-7342]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4800}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22172 22172]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3018}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00766 R00766]
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{{#set: centisome position=45.362995    }}
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* PIR:
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{{#set: reaction associated=3.2.1.6-RXN|3.2.1.73-RXN|QUINOPRIBOTRANS-RXN}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4783 JC4783]
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{{#set: pathway associated=PWY-5316|PWY-5653|PYRIDNUCSYN-PWY|PWY-7342}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JQ1329 JQ1329]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JQ2277 JQ2277]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S34172 S34172]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72648 S72648]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72649 S72649]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72650 S72650]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04103 T04103]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09833 T09833]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09837 T09837]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T12195 T12195]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q43802 Q43802]
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** [http://www.uniprot.org/uniprot/P31927 P31927]
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** [http://www.uniprot.org/uniprot/P31928 P31928]
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** [http://www.uniprot.org/uniprot/Q43845 Q43845]
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** [http://www.uniprot.org/uniprot/O22060 O22060]
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** [http://www.uniprot.org/uniprot/O22081 O22081]
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** [http://www.uniprot.org/uniprot/O22096 O22096]
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** [http://www.uniprot.org/uniprot/Q43010 Q43010]
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** [http://www.uniprot.org/uniprot/O04932 O04932]
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** [http://www.uniprot.org/uniprot/O04933 O04933]
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** [http://www.uniprot.org/uniprot/Q43876 Q43876]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=sucrose-phosphate_synthase}}
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{{#set: ec number=EC-2.4.1.14}}
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{{#set: gene associated=Tiso_gene_14247}}
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{{#set: in pathway=PWY-7238|PWY-7347|SUCSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:14, 21 March 2018

Gene Tiso_gene_12892

  • right end position:
    • 4800
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3018
  • centisome position:
    • 45.362995
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12892&oldid=40398"