Difference between revisions of "3.1.26.4-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_13305 == * left end position: ** 3486 * transcription direction: ** NEGATIVE * right end position: ** 6380 * centisome position: ** 54.5710...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonuclease ** ORF *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_13305 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] ==
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* left end position:
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* direction:
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** 3486
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** ribonuclease
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* right end position:
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** ORF
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** 6380
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* ec number:
−
* centisome position:
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** [http://enzyme.expasy.org/EC/3.1.26.4 EC-3.1.26.4]
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** 54.571068   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.2.1.21-RXN]]
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* With identifiers:
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** in-silico_annotation
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** n [[WATER]][c] '''+''' 1 [[RNA-DNA-hybrids]][c] '''=>''' n [[Nucleoside-Monophosphates]][c] '''+''' 1 [[DNA-Holder]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** n H2O[c] '''+''' 1 a RNA-DNA hybrid[c] '''=>''' n a nucleoside 5'-monophosphate[c] '''+''' 1 DNA[c]
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***ec-number
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* [[RXN-10769]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* Gene: [[Tiso_gene_16584]]
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** experimental_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
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* [[RXN-10773]]
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* Gene: [[Tiso_gene_9459]]
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** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
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** experimental_annotation
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** Source: [[orthology-esiliculosus]]
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***ec-number
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* Gene: [[Tiso_gene_9453]]
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* [[RXN-13602]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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* Gene: [[Tiso_gene_3410]]
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** experimental_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
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* [[RXN-13603]]
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* Gene: [[Tiso_gene_10743]]
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** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
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** experimental_annotation
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== Pathways ==
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***ec-number
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== Reconstruction information  ==
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* [[RXN-14179]]
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* Category: [[orthology]]
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** in-silico_annotation
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** Source: [[orthology-esiliculosus]]
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***ec-number
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*** Tool: [[pantograph]]
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** experimental_annotation
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* Category: [[annotation]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-5341]]
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*** Tool: [[pathwaytools]]
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** in-silico_annotation
+
−
***ec-number
+
−
** experimental_annotation
+
−
***ec-number
+
−
* [[RXN-8036]]
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−
** in-silico_annotation
+
−
***ec-number
+
−
** experimental_annotation
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−
***ec-number
+
−
* [[RXN-9674]]
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−
** in-silico_annotation
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−
***ec-number
+
−
** experimental_annotation
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−
***ec-number
+
−
== Pathways associated ==
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−
* [[PWY-3121]]
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−
* [[PWY-6002]]
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−
* [[PWY-6788]]
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−
* [[PWY-5176]]
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−
* [[PWY-7092]]
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−
* [[PWY-7091]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3486}}
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* UNIPROT:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/P52975 P52975]
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{{#set: right end position=6380}}
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** [http://www.uniprot.org/uniprot/Q9CDG3 Q9CDG3]
−
{{#set: centisome position=54.571068    }}
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** [http://www.uniprot.org/uniprot/Q9PM39 Q9PM39]
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{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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** [http://www.uniprot.org/uniprot/Q9JX40 Q9JX40]
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{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
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** [http://www.uniprot.org/uniprot/P43807 P43807]
 +
** [http://www.uniprot.org/uniprot/P43808 P43808]
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** [http://www.uniprot.org/uniprot/Q9PJA1 Q9PJA1]
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** [http://www.uniprot.org/uniprot/Q9CG17 Q9CG17]
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** [http://www.uniprot.org/uniprot/Q9JTD9 Q9JTD9]
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** [http://www.uniprot.org/uniprot/Q57599 Q57599]
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** [http://www.uniprot.org/uniprot/O44114 O44114]
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** [http://www.uniprot.org/uniprot/P0A7Y4 P0A7Y4]
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** [http://www.uniprot.org/uniprot/P10442 P10442]
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** [http://www.uniprot.org/uniprot/P13319 P13319]
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** [http://www.uniprot.org/uniprot/Q7LYY8 Q7LYY8]
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** [http://www.uniprot.org/uniprot/P0A2B9 P0A2B9]
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** [http://www.uniprot.org/uniprot/Q04740 Q04740]
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** [http://www.uniprot.org/uniprot/Q49050 Q49050]
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** [http://www.uniprot.org/uniprot/O69014 O69014]
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** [http://www.uniprot.org/uniprot/Q54222 Q54222]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ribonuclease}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.26.4}}
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{{#set: gene associated=Tiso_gene_16584|Tiso_gene_9459|Tiso_gene_9453|Tiso_gene_3410|Tiso_gene_10743}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:15, 21 March 2018

Reaction 3.1.26.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonuclease
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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