Difference between revisions of "PWY-6894"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GPPS GPPS] == * direction: ** LEFT-TO-RIGHT * common name: ** geranyl pyrophosphate synthase * Syno...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6894 PWY-6894] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GPPS GPPS] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6894 PWY-6894] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** geranyl pyrophosphate synthase
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** thiamine diphosphate biosynthesis I (E. coli)
 
* Synonym(s):
 
* Synonym(s):
 +
** vitamin B1 biosynthesis
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** thiamin diphosphate biosynthesis I (E. coli)
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
** 1.0 [[CPD-4211]][c] '''+''' 1.0 [[DELTA3-ISOPENTENYL-PP]][c] '''=>''' 1.0 [[PPI]][c] '''+''' 1.0 [[GERANYL-PP]][c]
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* [[RXN-12611]]
* With common name(s):
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** 3 associated gene(s):
** 1.0 dimethylallyl diphosphate[c] '''+''' 1.0 isopentenyl diphosphate[c] '''=>''' 1.0 diphosphate[c] '''+''' 1.0 geranyl diphosphate[c]
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*** [[Tiso_gene_2159]]
 
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*** [[Tiso_gene_2160]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_10320]]
Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
* [[Tiso_gene_16284]]
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*** [[annotation-in-silico_annotation]]
** [[pantograph]]-[[creinhardtii]]
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== Reaction(s) not found ==
* [[Tiso_gene_18201]]
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* [http://metacyc.org/META/NEW-IMAGE?object=THI-P-KIN-RXN THI-P-KIN-RXN]
** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_2848]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
{{#set: common name=geranyl pyrophosphate synthase}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6894 PWY-6894]
{{#set: gene associated=Tiso_gene_16284|Tiso_gene_18201|Tiso_gene_2848}}
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{{#set: taxonomic range=TAX-2}}
{{#set: in pathway=}}
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{{#set: common name=thiamine diphosphate biosynthesis I (E. coli)}}
{{#set: reconstruction category=orthology}}
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{{#set: common name=vitamin B1 biosynthesis|thiamin diphosphate biosynthesis I (E. coli)}}
{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reaction found=1}}
{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=2}}
 +
{{#set: completion rate=50.0}}

Latest revision as of 19:15, 21 March 2018

Pathway PWY-6894

  • taxonomic range:
  • common name:
    • thiamine diphosphate biosynthesis I (E. coli)
  • Synonym(s):
    • vitamin B1 biosynthesis
    • thiamin diphosphate biosynthesis I (E. coli)

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links