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| − | [[Category:Pathway]] | + | [[Category:Gene]] |
| − | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] == | + | == Gene Tiso_gene_8826 == |
| − | * taxonomic range: | + | * right end position: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] | + | ** 4194 |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157] | + | * transcription direction: |
| − | * common name: | + | ** NEGATIVE |
| − | ** TCA cycle I (prokaryotic) | + | * left end position: |
| | + | ** 25 |
| | + | * centisome position: |
| | + | ** 0.25385866 |
| | * Synonym(s): | | * Synonym(s): |
| − | ** tricarboxylic acid cycle
| |
| − | ** citric acid cycle
| |
| − | ** Krebs cycle
| |
| − | ** Szent-Gyorgyi-Krebs cycle
| |
| | | | |
| − | == Reaction(s) found == | + | == Reactions associated == |
| − | '''7''' reactions found over '''10''' reactions in the full pathway
| + | * Reaction: [[3.6.4.1-RXN]] |
| − | * [[ACONITATEDEHYDR-RXN]] | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ** 1 associated gene(s):
| + | *** Assignment: automated-name-match |
| − | *** [[Tiso_gene_13007]]
| + | == Pathways associated == |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | * [[ACONITATEHYDR-RXN]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_13007]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | * [[CITSYN-RXN]]
| + | |
| − | ** 4 associated gene(s):
| + | |
| − | *** [[Tiso_gene_18030]]
| + | |
| − | *** [[Tiso_gene_9601]]
| + | |
| − | *** [[Tiso_gene_9603]]
| + | |
| − | *** [[Tiso_gene_9602]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | * [[FUMHYDR-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_6720]]
| + | |
| − | *** [[Tiso_gene_3691]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[ISOCITDEH-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_18262]]
| + | |
| − | *** [[Tiso_gene_10809]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[MALATE-DEH-RXN]]
| + | |
| − | ** 2 associated gene(s): | + | |
| − | *** [[Tiso_gene_1990]]
| + | |
| − | *** [[Tiso_gene_2323]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]] | + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[SUCCCOASYN-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_15846]]
| + | |
| − | *** [[Tiso_gene_11866]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | == Reaction(s) not found == | + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-ACCEPTOR-RXN MALATE-DEHYDROGENASE-ACCEPTOR-RXN]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
| + | |
| | == External links == | | == External links == |
| − | * ECOCYC:
| + | {{#set: right end position=4194}} |
| − | ** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TCA TCA]
| + | {{#set: transcription direction=NEGATIVE}} |
| − | * ARACYC:
| + | {{#set: left end position=25}} |
| − | ** [http://metacyc.org/ARA/NEW-IMAGE?object=TCA TCA]
| + | {{#set: centisome position=0.25385866 }} |
| − | {{#set: taxonomic range=TAX-2}} | + | {{#set: reaction associated=3.6.4.1-RXN}} |
| − | {{#set: taxonomic range=TAX-2157}} | + | |
| − | {{#set: common name=TCA cycle I (prokaryotic)}} | + | |
| − | {{#set: common name=tricarboxylic acid cycle|citric acid cycle|Krebs cycle|Szent-Gyorgyi-Krebs cycle}} | + | |
| − | {{#set: reaction found=7}} | + | |
| − | {{#set: total reaction=10}}
| + | |
| − | {{#set: completion rate=70.0}}
| + | |
