Difference between revisions of "RXN3DJ-11230"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-11230 RXN3DJ-11230] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-11230 RXN3DJ-11230] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* ec number:
* common name:
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** [http://enzyme.expasy.org/EC/4.3.2 EC-4.3.2]
** S-adenosyl-L-methionine cycle II
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* Synonym(s):
 
* Synonym(s):
** activated methyl cycle
 
** SAM cycle
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''4''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
* [[ADENOSYLHOMOCYSTEINASE-RXN]]
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** 1 [[CPD3DJ-11366]][c] '''=>''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c] '''+''' 1 [[CPD-292]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_14191]]
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** 1 sphingosine 1-phosphate[c] '''=>''' 1 O-phosphoethanolamine[c] '''+''' 1 (2E)-hexadecenal[c]
** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_105]]
*** [[orthology-athaliana]]
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** Source: [[orthology-athaliana]]
*** [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
*** [[manual-primary_network]]
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== Pathways  ==
*** [[orthology-creinhardtii]]
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* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
* [[HOMOCYSMET-RXN]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
** 1 associated gene(s):
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== Reconstruction information  ==
*** [[Tiso_gene_1602]]
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* Category: [[orthology]]
** 2 reconstruction source(s) associated:
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** Source: [[orthology-athaliana]]
*** [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
*** [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
* [[RXN-7605]]
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*** Tool: [[pantograph]]
** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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* [[S-ADENMETSYN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13443]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
+
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
* ARACYC:
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* RHEA:
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5041 PWY-5041]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33508 33508]
{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06516 R06516]
{{#set: common name=S-adenosyl-L-methionine cycle II}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=activated methyl cycle|SAM cycle}}
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{{#set: ec number=EC-4.3.2}}
{{#set: reaction found=4}}
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{{#set: gene associated=Tiso_gene_105}}
{{#set: total reaction=4}}
+
{{#set: in pathway=PWY3DJ-11470}}
{{#set: completion rate=100.0}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:15, 21 March 2018

Reaction RXN3DJ-11230

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY3DJ-11470, sphingosine and sphingosine-1-phosphate metabolism: PWY3DJ-11470
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links