Difference between revisions of "Tiso gene 19780"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5...")
(Created page with "Category:Gene == Gene Tiso_gene_19780 == * right end position: ** 2019 * transcription direction: ** POSITIVE * left end position: ** 4 * centisome position: ** 0.19598235...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN] ==
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== Gene Tiso_gene_19780 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
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** 2019
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* common name:
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* transcription direction:
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** flavonoid biosynthesis
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** POSITIVE
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* left end position:
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** 4
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* centisome position:
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** 0.19598235   
 
* Synonym(s):
 
* Synonym(s):
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** flavonoid biosynthesis
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''4''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[DIHYDLIPACETRANS-RXN]]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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** Source: [[orthology-creinhardtii]]
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** 2 associated gene(s):
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* Reaction: [[PYRUVDEH-RXN]]
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*** [[Tiso_gene_12275]]
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_14183]]
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** Source: [[orthology-athaliana]]
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** 2 reconstruction source(s) associated:
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** Source: [[orthology-synechocystis]]
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*** [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN0-1133]]
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* [[APIGNAR-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Tiso_gene_9838]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_13414]]
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== Pathways associated ==
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** 2 reconstruction source(s) associated:
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* [[PYRUVDEHYD-PWY]]
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*** [[annotation-in-silico_annotation]]
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* [[PWY-7218]]
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*** [[orthology-esiliculosus]]
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* [[PWY-7384]]
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* [[NARINGENIN-3-DIOXYGENASE-RXN]]
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* [[PWY-6886]]
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** 1 associated gene(s):
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* [[PWY-5537]]
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*** [[Tiso_gene_3330]]
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* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
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** 2 reconstruction source(s) associated:
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* [[PWY-5482]]
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-3142]]
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** 1 associated gene(s):
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*** [[Tiso_gene_2613]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=NARINGENIN-CHALCONE-SYNTHASE-RXN NARINGENIN-CHALCONE-SYNTHASE-RXN]
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== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: right end position=2019}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-58024}}
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{{#set: left end position=4}}
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{{#set: common name=flavonoid biosynthesis}}
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{{#set: centisome position=0.19598235    }}
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{{#set: common name=flavonoid biosynthesis}}
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{{#set: reaction associated=DIHYDLIPACETRANS-RXN|PYRUVDEH-RXN|RXN0-1133}}
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{{#set: reaction found=4}}
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{{#set: pathway associated=PYRUVDEHYD-PWY|PWY-7218|PWY-7384|PWY-6886|PWY-5537|GLYCOLYSIS-TCA-GLYOX-BYPASS|PWY-5482}}
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{{#set: total reaction=5}}
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{{#set: completion rate=80.0}}
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Latest revision as of 19:15, 21 March 2018

Gene Tiso_gene_19780

  • right end position:
    • 2019
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4
  • centisome position:
    • 0.19598235
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19780&oldid=40449"